myRT

myRT report for GCA_002762835.1_ASM276283v1

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Seq: PCYD01000021.1 Candidatus Woesearchaeota archaeon CG10_big_fil_rev_8_21_14_0_10_34_12 CG10_8_21_14_0.10_scaffold_1232_c, whole genome shotgun sequence (28423 bp)
Overview 1 RT 1: 239-4964 bp Neighborhood of RT #1 [239, 4975] UppS RVT-DGRs HTH_40 PRK05431 Feature: gene Location: 239-925 bp Feature: domain Description: UppS Location: 260-923 bp Feature: domain Description: UppS Location: 260-923 bp Feature: gene Location: 1001-2407 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1193-1799 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 93-1 799 bp Feature: domain Description: HTH_40 Location: 2093-2351 bp Feature: domain Description: HTH_40 Location: 2093-2351 bp Feature: gene Location: 2913-3626 bp Feature: gene Location: 3683-4975 bp Feature: domain Description: PRK05431 Location: 3686-4964 bp Feature: domain Description: PRK05431 Location: 3686-4964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, HTH_40 (pfam14493), UppS (COG0020), PRK05431 (seryl-tRNA synthetase; Provisional)

Seq: PCYD01000035.1 Candidatus Woesearchaeota archaeon CG10_big_fil_rev_8_21_14_0_10_34_12 CG10_8_21_14_0.10_scaffold_1956_c, whole genome shotgun sequence (28260 bp)
Overview 1 RT 1: 6422-11990 bp Neighborhood of RT #1 [6422, 12046] Beta_helix NosD YfmG Avd_like RVT-DGRs HTH_ARSR Polbeta HEPN Feature: gene Location: 6422-9010 bp Feature: domain Description: Beta_helix Location: 6428-6896 bp Feature: domain Description: Beta_helix Location: 642 8-6896 bp Feature: domain Description: NosD Location: 6920-7382 bp Feature: domain Description: NosD Location: 692 0-7382 bp Feature: domain Description: YfmG Location: 8447-8999 bp Feature: domain Description: YfmG Location: 8447-8999 bp Feature: gene Location: 9090-9527 bp Feature: domain Description: Avd_like Location: 9186-9480 bp Feature: domain Description: Avd_like Location: 9186-9480 bp Feature: gene Location: 9514-10836 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9721-10360 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 972 1-10360 bp Feature: gene Location: 10885-11658 bp Feature: domain Description: HTH_ARSR Location: 10894-11065 bp Feature: domain Description: HTH_ARSR Location: 10894-11065 bp Feature: domain Description: Polbeta Location: 11167-11401 bp Feature: domain Description: Polbeta Location: 11167-11401 bp Feature: gene Location: 11636-12046 bp Feature: domain Description: HEPN Location: 11666-11990 bp Feature: domain Description: HEPN Location: 11666-11990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), Polbeta (pfam18765), HEPN (smart00748), Beta_helix (pfam13229), NosD (pfam05048), YfmG (COG1262), Avd_like (cd16376), RVT-DGRs

Seq: PCYD01000017.1 Candidatus Woesearchaeota archaeon CG10_big_fil_rev_8_21_14_0_10_34_12 CG10_8_21_14_0.10_scaffold_2233_c, whole genome shotgun sequence (20649 bp)
Overview 1 RT 1: 15143-20649 bp Neighborhood of RT #1 [15143, 20649] PRK14977 PRK14977 nusA_arch RVT-DGRs Feature: gene Location: 15143-18697 bp Feature: domain Description: PRK14977 Location: 15170-17645 bp Feature: domain Description: PRK14977 Location: 15170-17645 bp Feature: domain Description: PRK14977 Location: 17654-18638 bp Feature: domain Description: PRK14977 Location: 17654-1863 8 bp Feature: gene Location: 18767-19186 bp Feature: domain Description: nusA_arch Location: 18791-19184 bp Feature: domain Description: nusA_arch Location: 18791-19184 bp Feature: gene Location: 19250-20049 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19304-19616 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 193 04-19616 bp Feature: gene Location: 20049-20649 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14977 (bifunctional DNA-directed RNA polymerase A'/A'' subunit; Provisional), nusA_arch (TIGR01952), RVT-DGRs