myRT

myRT report for GCA_002764155.1_ASM276415v1

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Seq: CP024661.1 Escherichia coli strain 90-9269 chromosome (4760041 bp)
Overview 1 RT 1: 3025712-3030305 bp 2 RT 2: 3470466-3473781 bp Neighborhood of RT #1 [3025712, 3030316] InsA DDE_Tnp_IS1 RVT-UG8 RVT-UG3 PRK09692 PRK14702 Neighborhood of RT #2 [3470466, 3473819] PHA02517 RVT-GII GIIM PHA02517 INT_P4_C Feature: gene Location: 3025712-3025987 bp Feature: domain Description: InsA Location: 3025715-3025982 bp Feature: domain Description: InsA Location: 302571 5-3025982 bp Feature: gene Location: 3025906-3026409 bp Feature: domain Description: DDE_Tnp_IS1 Location: 3026017-3026407 bp Feature: domain Description: DDE_Tnp_IS1 Location: 302601 7-3026407 bp Feature: gene Location: 3026420-3027280 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3026915-3027272 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 302691 5-3027272 bp Feature: gene Location: 3027284-3028480 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3027569-3028031 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3027569-3028031 bp Feature: gene Location: 3028482-3029660 bp Feature: domain Description: PRK09692 Location: 3028488-3029643 bp Feature: domain Description: PRK09692 Location: 3028488-3029643 bp Feature: gene Location: 3030131-3030316 bp Feature: domain Description: PRK14702 Location: 3030134-3030305 bp Feature: domain Description: PRK1 4702 Location: 30301 34-3030305 bp Feature: gene Location: 3470466-3470594 bp Feature: gene Location: 3470642-3470923 bp Feature: domain Description: PHA02517 Location: 3470648-3470858 bp Feature: domain Description: PHA0251 7 Location: 3470648-3470858 bp Feature: gene Location: 3471515-3473038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3471788-3472520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3471 788-3472520 bp Feature: domain Description: GIIM Note: maturase Location: 3472595-3472793 bp Feature: domain Description: GIIM Note: maturase Location: 3472595-3472793 bp Feature: gene Location: 3473215-3473601 bp Feature: domain Description: PHA02517 Location: 3473218-3473599 bp Feature: domain Description: PHA0251 7 Location: 347321 8-3473599 bp Feature: gene Location: 3473604-3473819 bp Feature: domain Description: INT_P4_C Location: 3473616-3473781 bp Feature: domain Description: INT_P4_C Location: 347361 6-3473781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsA (COG3677), DDE_Tnp_IS1 (pfam03400), RVT-UG8, RVT-UG3, PRK09692 (Integrase; provisional), PRK14702 (insertion element IS2 transposase InsD; Provisional), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), INT_P4_C (cd00801)

Seq: CP024662.1 Escherichia coli strain 90-9269 plasmid unnamed1, complete sequence (160351 bp)
Overview 1 RT 1: 2771-6857 bp 2 RT 2: 68508-72715 bp 3 RT 3: 141881-145936 bp 4 RT 4: 155405-158678 bp Neighborhood of RT #1 [2771, 6922] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [68508, 72780] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM PHA02517 Neighborhood of RT #3 [141881, 145998] PHA02517 RVT-GII GIIM PHA02517 IstB_IS21_ATP IstB_IS21 Neighborhood of RT #4 [155405, 158683] PHA02517 RVT-GII GIIM RVT-GII YkfC Feature: gene Location: 2771-3094 bp Feature: gene Location: 3963-4409 bp Feature: domain Description: PHA02517 Location: 3966-4407 bp Feature: domain Description: PHA02 517 Location: 3966-4407 bp Feature: gene Location: 4526-6049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4799-5531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4799-5531 bp Feature: domain Description: GIIM Note: maturase Location: 5606-5804 bp Feature: domain Description: GIIM Note: maturase Location: 5606-5804 bp Feature: gene Location: 6003-6428 bp Feature: gene Location: 6641-6922 bp Feature: domain Description: PHA02517 Location: 6647-6857 bp Feature: domain Description: PHA02 517 Location: 6647-6857 bp Feature: gene Location: 68508-69938 bp Feature: domain Description: LZ_Tnp_IS66 Location: 68646-68871 bp Feature: domain Description: LZ_Tnp_IS66 Location: 68646-68871 bp Feature: domain Description: zf-IS66 Location: 68892-69024 bp Feature: domain Description: zf-IS66 Location: 68892 -6902 4 bp Feature: domain Description: DDE_Tnp_IS66 Location: 69069-69774 bp Feature: domain Description: DDE_Tnp_IS66 Location: 69069-69774 bp Feature: gene Location: 70142-70270 bp Feature: gene Location: 70383-71906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70656-71388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70656-71388 bp Feature: domain Description: GIIM Note: maturase Location: 71463-71661 bp Feature: domain Description: GIIM Note: maturase Location: 71463-71661 bp Feature: gene Location: 71860-72276 bp Feature: gene Location: 72499-72780 bp Feature: domain Description: PHA02517 Location: 72505-72715 bp Feature: domain Description: PHA02 517 Location: 72 505-72 715 bp Feature: gene Location: 141881-142009 bp Feature: gene Location: 142057-142338 bp Feature: domain Description: PHA02517 Location: 142063-142273 bp Feature: domain Description: PHA02 517 Location: 142 063-142 2 73 bp Feature: gene Location: 142930-144453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143203-143935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1432 03-143935 bp Feature: domain Description: GIIM Note: maturase Location: 144010-144208 bp Feature: domain Description: GIIM Note: maturase Location: 144010-1442 08 bp Feature: gene Location: 144630-145016 bp Feature: domain Description: PHA02517 Location: 144633-145014 bp Feature: domain Description: PHA02 517 Location: 144633-145014 bp Feature: gene Location: 145249-145998 bp Feature: domain Description: IstB_IS21_ATP Location: 145321-145405 bp Feature: domain Description: IstB_IS2 1_ATP Location: 14532 1-145405 bp Feature: domain Description: IstB_IS21 Location: 145408-145936 bp Feature: domain Description: IstB_IS2 1 Location: 145408-145936 bp Feature: gene Location: 155405-155758 bp Feature: gene Location: 156594-157040 bp Feature: domain Description: PHA02517 Location: 156597-157038 bp Feature: domain Description: PHA02 517 Location: 156597-157038 bp Feature: gene Location: 157157-157837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157193-157319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157193-157319 bp Feature: domain Description: GIIM Note: maturase Location: 157394-157613 bp Feature: domain Description: GIIM Note: maturase Location: 157394-157613 bp Feature: gene Location: 157986-158309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157992-158265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157992 -1582 65 bp Feature: gene Location: 158334-158504 bp Feature: gene Location: 158513-158683 bp Feature: domain Description: YkfC Location: 158522-158678 bp Feature: domain Description: YkfC Location: 15852 2 -158678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), YkfC (COG3344)

Seq: CP024666.1 Escherichia coli strain 90-9269 plasmid unnamed5 (20753 bp)
Overview 1 RT 1: 5221-8550 bp Neighborhood of RT #1 [5221, 8615] IstB_IS21_ATP PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 5221-5424 bp Feature: domain Description: IstB_IS21_ATP Location: 5293-5377 bp Feature: domain Description: IstB_IS21_ATP Location: 5293 -53 77 bp Feature: gene Location: 5656-6102 bp Feature: domain Description: PHA02517 Location: 5659-6100 bp Feature: domain Description: PHA02517 Location: 5659-6100 bp Feature: gene Location: 6219-7742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6492-7224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6492-7224 bp Feature: domain Description: GIIM Note: maturase Location: 7299-7497 bp Feature: domain Description: GIIM Note: maturase Location: 7299-7497 bp Feature: gene Location: 7696-8121 bp Feature: gene Location: 8334-8615 bp Feature: domain Description: PHA02517 Location: 8340-8550 bp Feature: domain Description: PHA02517 Location: 83 40-8550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21_ATP (pfam08483), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)