myRT

myRT report for GCA_002764175.1_ASM276417v1

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Seq: CP024667.1 Escherichia coli strain F5176C6 chromosome (5069417 bp)
Overview 1 RT 1: 773517-777936 bp 2 RT 2: 1853875-1857221 bp 3 RT 3: 3491999-3496015 bp Neighborhood of RT #1 [773517, 778001] IAT_beta PRK15318 Invasin_D3 PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [1853875, 1857286] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #3 [3491999, 3496015] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 773517-774902 bp Feature: domain Description: IAT_beta Location: 773526-774309 bp Feature: domain Description: IAT_beta Location: 773526-774309 bp Feature: domain Description: PRK15318 Location: 774510-774633 bp Feature: domain Description: PRK1 531 8 Location: 77451 0-774633 bp Feature: domain Description: Invasin_D3 Location: 774648-774885 bp Feature: domain Description: Invasin_D3 Location: 774648-774885 bp Feature: gene Location: 774904-775338 bp Feature: domain Description: PHA02517 Location: 774907-775330 bp Feature: domain Description: PHA0251 7 Location: 774907-775330 bp Feature: gene Location: 775461-776984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 775734-776466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 775734-776466 bp Feature: domain Description: GIIM Note: maturase Location: 776541-776739 bp Feature: domain Description: GIIM Note: maturase Location: 776541 -776739 bp Feature: gene Location: 776938-777363 bp Feature: gene Location: 777576-778001 bp Feature: domain Description: PHA02517 Location: 777597-777936 bp Feature: domain Description: PHA0251 7 Location: 777597-777936 bp Feature: gene Location: 1853875-1854168 bp Feature: gene Location: 1854174-1854578 bp Feature: domain Description: PHA02517 Location: 1854177-1854567 bp Feature: domain Description: PHA0251 7 Location: 1 8541 77-1 854567 bp Feature: gene Location: 1854743-1856266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1855016-1855748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 85501 6-1 855748 bp Feature: domain Description: GIIM Note: maturase Location: 1855823-1856021 bp Feature: domain Description: GIIM Note: maturase Location: 1 855823-1 856021 bp Feature: gene Location: 1856220-1856645 bp Feature: gene Location: 1856858-1857286 bp Feature: domain Description: PHA02517 Location: 1856882-1857221 bp Feature: domain Description: PHA0251 7 Location: 1 856882-1 857221 bp Feature: gene Location: 3491999-3492142 bp Feature: gene Location: 3492246-3492728 bp Feature: domain Description: PHA02517 Location: 3492309-3492663 bp Feature: domain Description: PHA0251 7 Location: 3492309-3492663 bp Feature: gene Location: 3493320-3494843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3493593-3494325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3493593-3494325 bp Feature: domain Description: GIIM Note: maturase Location: 3494400-3494598 bp Feature: domain Description: GIIM Note: maturase Location: 3494400-3494598 bp Feature: gene Location: 3495020-3495406 bp Feature: domain Description: PHA02517 Location: 3495023-3495404 bp Feature: domain Description: PHA0251 7 Location: 3495023-3495404 bp Feature: gene Location: 3495539-3496015 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IAT_beta (pfam11924), PRK15318 (intimin-like protein SinH; Provisional), Invasin_D3 (pfam09134), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: CP024668.1 Escherichia coli strain F5176C6 plasmid unnamed1, complete sequence (167071 bp)
Overview 1 RT 1: 59488-63131 bp 2 RT 2: 131994-139814 bp Neighborhood of RT #1 [59488, 63131] Ogr_Delta D RVT-GII GIIM Neighborhood of RT #2 [131994, 139837] DDE_Tnp_Tn3 RVT-GII GIIM Peptidase_S6 autotrans_barl HTH_23 InsE Feature: gene Location: 59488-59748 bp Feature: domain Description: Ogr_Delta Location: 59497-59638 bp Feature: domain Description: Ogr_Delta Location: 59497-59638 bp Feature: gene Location: 59791-60162 bp Feature: domain Description: D Location: 59824-60136 bp Feature: domain Description: D Location: 5982 4-60136 bp Feature: gene Location: 60300-61697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60651-61338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60651-61338 bp Feature: domain Description: GIIM Note: maturase Location: 61455-61623 bp Feature: domain Description: GIIM Note: maturase Location: 61455-6162 3 bp Feature: gene Location: 61537-62088 bp Feature: gene Location: 62442-63131 bp Feature: gene Location: 131994-132185 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 131997-132105 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 131997-132 105 bp Feature: gene Location: 132405-132677 bp Feature: gene Location: 132688-134019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132973-133660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 973-133660 bp Feature: domain Description: GIIM Note: maturase Location: 133777-133945 bp Feature: domain Description: GIIM Note: maturase Location: 133777-133945 bp Feature: gene Location: 134818-138912 bp Feature: domain Description: Peptidase_S6 Location: 134971-137155 bp Feature: domain Description: Peptidase_S6 Location: 134971-137155 bp Feature: domain Description: autotrans_barl Location: 137689-138910 bp Feature: domain Description: autotrans_barl Location: 137689-138910 bp Feature: gene Location: 139160-139837 bp Feature: domain Description: HTH_23 Location: 139220-139331 bp Feature: domain Description: HTH_2 3 Location: 1392 2 0-139331 bp Feature: domain Description: InsE Location: 139463-139814 bp Feature: domain Description: InsE Location: 139463-139814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ogr_Delta (pfam04606), D (PHA02561), RVT-GII, GIIM (pfam08388), DDE_Tnp_Tn3 (pfam01526), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414), HTH_23 (pfam13384), InsE (COG2963)