myRT

myRT report for GCA_002767065.1_ASM276706v1

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Seq: PEOM01000072.1 Staphylococcus pseudintermedius strain 2080821017011 208082101701-1_11_length_105181_cov_76.0247_ID_21, whole genome shotgun sequence (105181 bp)
Overview 1 RT 1: 2-2560 bp Neighborhood of RT #1 [2, 2568] RVT-GII FepD Feature: gene Location: 2-337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-338 bp Feature: gene Location: 888-1409 bp Feature: gene Location: 1552-2568 bp Feature: domain Description: FepD Location: 1588-2560 bp Feature: domain Description: FepD Location: 1 588-2560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, FepD (COG0609)

Seq: PEOM01000043.1 Staphylococcus pseudintermedius strain 2080821017011 208082101701-1_12_length_101347_cov_75.6158_ID_23, whole genome shotgun sequence (101346 bp)
Overview 1 RT 1: 83015-85884 bp Neighborhood of RT #1 [83015, 85884] RVT-GII GIIM Feature: gene Location: 83015-83167 bp Feature: gene Location: 83188-83343 bp Feature: gene Location: 83445-84482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83670-84285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83670-842 85 bp Feature: domain Description: GIIM Note: maturase Location: 84345-84459 bp Feature: domain Description: GIIM Note: maturase Location: 84345-84459 bp Feature: gene Location: 84561-84740 bp Feature: gene Location: 85717-85884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PEOM01000055.1 Staphylococcus pseudintermedius strain 2080821017011 208082101701-1_13_length_94215_cov_74.0832_ID_25, whole genome shotgun sequence (94213 bp)
Overview 1 RT 1: 2-2698 bp Neighborhood of RT #1 [2, 2698] RVT-GII NarK Feature: gene Location: 2-337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-3 3 8 bp Feature: gene Location: 917-2095 bp Feature: domain Description: NarK Location: 932-2075 bp Feature: domain Description: NarK Location: 93 2-2075 bp Feature: gene Location: 2528-2698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, NarK (COG2223)

Seq: PEOM01000050.1 Staphylococcus pseudintermedius strain 2080821017011 208082101701-1_1_length_440071_cov_64.7078_ID_1, whole genome shotgun sequence (440071 bp)
Overview 1 RT 1: 2-3159 bp Neighborhood of RT #1 [2, 3164] RVT-GII ispG SodA Feature: gene Location: 2-337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-338 bp Feature: gene Location: 1112-2218 bp Feature: domain Description: ispG Location: 1121-2174 bp Feature: domain Description: ispG Location: 1121-2174 bp Feature: gene Location: 2565-3164 bp Feature: domain Description: SodA Location: 2568-3159 bp Feature: domain Description: SodA Location: 2568-3159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, ispG (PRK00366), SodA (COG0605)

Seq: PEOM01000052.1 Staphylococcus pseudintermedius strain 2080821017011 208082101701-1_21_length_43622_cov_72.6552_ID_41, whole genome shotgun sequence (43631 bp)
Overview 1 RT 1: 40812-43631 bp Neighborhood of RT #1 [40812, 43630] CcmA EcsB RVT-GII Feature: gene Location: 40812-41549 bp Feature: domain Description: CcmA Location: 40818-41490 bp Feature: domain Description: CcmA Location: 40818-41490 bp Feature: gene Location: 41642-42760 bp Feature: domain Description: EcsB Location: 41648-42695 bp Feature: domain Description: EcsB Location: 41648-42695 bp Feature: gene Location: 43295-43630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43520-43631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 435 20-43631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcmA (COG4133), EcsB (pfam05975), RVT-GII

Seq: PEOM01000003.1 Staphylococcus pseudintermedius strain 2080821017011 208082101701-1_25_length_13942_cov_91.7673_ID_49, whole genome shotgun sequence (13940 bp)
Overview 1 RT 1: 2-2761 bp Neighborhood of RT #1 [2, 2763] RVT-GII PRK00331 Feature: gene Location: 2-337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-338 bp Feature: gene Location: 439-597 bp Feature: gene Location: 919-2763 bp Feature: domain Description: PRK00331 Location: 964-2761 bp Feature: domain Description: PRK00331 Location: 96 4-276 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK00331 (isomerizing glutamine--fructose-6-phosphate transaminase)

Seq: PEOM01000027.1 Staphylococcus pseudintermedius strain 2080821017011 208082101701-1_44_length_654_cov_603.301_ID_87, whole genome shotgun sequence (654 bp)
Overview 1 RT 1: 1-556 bp Neighborhood of RT #1 [1, 651] RVT-GII Feature: gene Location: 1-651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PEOM01000026.1 Staphylococcus pseudintermedius strain 2080821017011 208082101701-1_4_length_161573_cov_69.7592_ID_7, whole genome shotgun sequence (161573 bp)
Overview 1 RT 1: 2-1974 bp Neighborhood of RT #1 [2, 1982] RVT-GII PenP Feature: gene Location: 2-337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-338 bp Feature: gene Location: 705-863 bp Feature: gene Location: 1095-1982 bp Feature: domain Description: PenP Location: 1149-1974 bp Feature: domain Description: PenP Location: 1149-1974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PenP (COG2367)

Seq: PEOM01000009.1 Staphylococcus pseudintermedius strain 2080821017011 208082101701-1_9_length_110206_cov_68.9541_ID_17, whole genome shotgun sequence (110205 bp)
Overview 1 RT 1: 2-2099 bp Neighborhood of RT #1 [2, 2152] RVT-GII FtsW Feature: gene Location: 2-337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-338 bp Feature: gene Location: 439-594 bp Feature: gene Location: 920-2152 bp Feature: domain Description: FtsW Location: 959-2099 bp Feature: domain Description: FtsW Location: 9 59 -209 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, FtsW (COG0772)