myRT

myRT report for GCA_002767625.1_ASM276762v1

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Seq: PEPB01000036.1 Staphylococcus pseudintermedius strain 2090805038021 209080503802-1_14_length_79464_cov_66.1978_ID_27, whole genome shotgun sequence (79464 bp)
Overview 1 RT 1: 77966-79464 bp Neighborhood of RT #1 [77966, 79463] TrkA RVT-GII Feature: gene Location: 77966-78625 bp Feature: domain Description: TrkA Location: 77975-78617 bp Feature: domain Description: TrkA Location: 77975-7861 7 bp Feature: gene Location: 78904-79062 bp Feature: gene Location: 79164-79463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79389-79464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79389-79464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrkA (COG0569), RVT-GII

Seq: PEPB01000037.1 Staphylococcus pseudintermedius strain 2090805038021 209080503802-1_15_length_64516_cov_76.3533_ID_29, whole genome shotgun sequence (64516 bp)
Overview 1 RT 1: 61390-64349 bp Neighborhood of RT #1 [61390, 64513] AraJ HmoA RVT-GII GIIM Feature: gene Location: 61390-62607 bp Feature: domain Description: AraJ Location: 61438-62581 bp Feature: domain Description: AraJ Location: 61438-62 581 bp Feature: gene Location: 62851-63279 bp Feature: domain Description: HmoA Location: 62983-63205 bp Feature: domain Description: HmoA Location: 62 983-632 05 bp Feature: gene Location: 63431-64513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63443-64058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63443-64058 bp Feature: domain Description: GIIM Note: maturase Location: 64118-64349 bp Feature: domain Description: GIIM Note: maturase Location: 64118-64349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraJ (COG2814), HmoA (COG2329), RVT-GII, GIIM (pfam08388)

Seq: PEPB01000021.1 Staphylococcus pseudintermedius strain 2090805038021 209080503802-1_20_length_10676_cov_99.8125_ID_39, whole genome shotgun sequence (10676 bp)
Overview 1 RT 1: 7664-10628 bp Neighborhood of RT #1 [7664, 10651] ABCF_EF-3 RVT-GII GIIM Feature: gene Location: 7664-8128 bp Feature: domain Description: ABCF_EF-3 Location: 7673-8114 bp Feature: domain Description: ABCF_EF-3 Location: 7673 -8114 bp Feature: gene Location: 8212-8379 bp Feature: gene Location: 9614-10651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9839-10454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 983 9-10454 bp Feature: domain Description: GIIM Note: maturase Location: 10514-10628 bp Feature: domain Description: GIIM Note: maturase Location: 10514-10628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABCF_EF-3 (cd03221), RVT-GII, GIIM (pfam08388)

Seq: PEPB01000003.1 Staphylococcus pseudintermedius strain 2090805038021 209080503802-1_30_length_1487_cov_274.952_ID_59, whole genome shotgun sequence (1488 bp)
Overview 1 RT 1: 3-1488 bp Neighborhood of RT #1 [3, 1487] PenP RVT-GII Feature: gene Location: 3-431 bp Feature: domain Description: PenP Location: 9-426 bp Feature: domain Description: PenP Location: 9-4 26 bp Feature: gene Location: 931-1086 bp Feature: gene Location: 1188-1487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1413-1488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 13-14 88 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PenP (COG2367)

Seq: PEPB01000047.1 Staphylococcus pseudintermedius strain 2090805038021 209080503802-1_33_length_1006_cov_598.856_ID_65, whole genome shotgun sequence (1006 bp)
Overview 1 RT 1: 2-884 bp Neighborhood of RT #1 [2, 1003] RVT-GII GIIM Feature: gene Location: 2-1003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 -5 93 bp Feature: domain Description: GIIM Note: maturase Location: 653-884 bp Feature: domain Description: GIIM Note: maturase Location: 65 3-884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PEPB01000057.1 Staphylococcus pseudintermedius strain 2090805038021 209080503802-1_50_length_326_cov_150.277_ID_99, whole genome shotgun sequence (326 bp)
Overview 1 RT 1: 26-326 bp Neighborhood of RT #1 [26, 325] RVT-GII Feature: gene Location: 26-325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251-326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251-326 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PEPB01000018.1 Staphylococcus pseudintermedius strain 2090805038021 209080503802-1_5_length_169182_cov_72.4199_ID_9, whole genome shotgun sequence (169181 bp)
Overview 1 RT 1: 2-822 bp Neighborhood of RT #1 [2, 822] RVT-GII Feature: gene Location: 2-301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227 -302 bp Feature: gene Location: 403-561 bp Feature: gene Location: 667-822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII