myRT

myRT report for GCA_002768275.1_ASM276827v1

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Seq: PEPX01000027.1 Staphylococcus pseudintermedius strain 2130327043011 213032704301-1_11_length_110892_cov_150.153_ID_21, whole genome shotgun sequence (110892 bp)
Overview 1 RT 1: 2-2788 bp Neighborhood of RT #1 [2, 2841] RVT-GII GIIM FtsW Feature: gene Location: 2-1027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-842 bp Feature: domain Description: GIIM Note: maturase Location: 902-1019 bp Feature: domain Description: GIIM Note: maturase Location: 902-1 01 9 bp Feature: gene Location: 1129-1287 bp Feature: gene Location: 1609-2841 bp Feature: domain Description: FtsW Location: 1648-2788 bp Feature: domain Description: FtsW Location: 1 648-2788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), FtsW (COG0772)

Seq: PEPX01000054.1 Staphylococcus pseudintermedius strain 2130327043011 213032704301-1_1_length_276083_cov_132.02_ID_1, whole genome shotgun sequence (276083 bp)
Overview 1 RT 1: 272525-276083 bp Neighborhood of RT #1 [272525, 276082] AglD2 MprF RVT-GII Feature: gene Location: 272525-275044 bp Feature: domain Description: AglD2 Location: 272543-273395 bp Feature: domain Description: AglD2 Location: 2 72 543-2 73395 bp Feature: domain Description: MprF Location: 273479-275036 bp Feature: domain Description: MprF Location: 2 73479-2 75036 bp Feature: gene Location: 275523-275681 bp Feature: gene Location: 275783-276082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276008-276083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 76008-2 76083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AglD2 (COG0392), MprF (COG2898), RVT-GII

Seq: PEPX01000025.1 Staphylococcus pseudintermedius strain 2130327043011 213032704301-1_21_length_42170_cov_149.273_ID_41, whole genome shotgun sequence (42170 bp)
Overview 1 RT 1: 40219-42170 bp Neighborhood of RT #1 [40219, 42169] EcsB RVT-GII Feature: gene Location: 40219-41337 bp Feature: domain Description: EcsB Location: 40225-41272 bp Feature: domain Description: EcsB Location: 40225-41272 bp Feature: gene Location: 41610-41768 bp Feature: gene Location: 41870-42169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42095-42170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42095-42170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EcsB (pfam05975), RVT-GII

Seq: PEPX01000088.1 Staphylococcus pseudintermedius strain 2130327043011 213032704301-1_28_length_13901_cov_203.394_ID_55, whole genome shotgun sequence (13901 bp)
Overview 1 RT 1: 2-2725 bp Neighborhood of RT #1 [2, 2727] RVT-GII PRK00331 Feature: gene Location: 2-301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-302 bp Feature: gene Location: 403-561 bp Feature: gene Location: 883-2727 bp Feature: domain Description: PRK00331 Location: 928-2725 bp Feature: domain Description: PRK00331 Location: 928-2725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK00331 (isomerizing glutamine--fructose-6-phosphate transaminase)

Seq: PEPX01000010.1 Staphylococcus pseudintermedius strain 2130327043011 213032704301-1_51_length_781_cov_1617.65_ID_101, whole genome shotgun sequence (781 bp)
Overview 1 RT 1: 1-772 bp Neighborhood of RT #1 [1, 780] RVT-GII GIIM Feature: gene Location: 1-780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-5 95 bp Feature: domain Description: GIIM Note: maturase Location: 655-772 bp Feature: domain Description: GIIM Note: maturase Location: 65 5 -772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PEPX01000012.1 Staphylococcus pseudintermedius strain 2130327043011 213032704301-1_64_length_552_cov_1049.55_ID_127, whole genome shotgun sequence (553 bp)
Overview 1 RT 1: 2-553 bp Neighborhood of RT #1 [2, 552] RVT-GII Feature: gene Location: 2-151 bp Feature: gene Location: 253-552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 478-553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 478-553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PEPX01000078.1 Staphylococcus pseudintermedius strain 2130327043011 213032704301-1_7_length_131060_cov_165.327_ID_13, whole genome shotgun sequence (131060 bp)
Overview 1 RT 1: 125087-130461 bp Neighborhood of RT #1 [125087, 130461] YeiB RVT-UG2 Acetyltransf_1 N6_acetyl_AAC6 APH_ChoK_like Feature: gene Location: 125087-125272 bp Feature: gene Location: 125437-126651 bp Feature: domain Description: YeiB Location: 125470-126637 bp Feature: domain Description: YeiB Location: 12547 0-126637 bp Feature: gene Location: 127239-128642 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 127419-128235 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 127 419-128235 bp Feature: domain Description: Acetyltransf_1 Location: 128310-128580 bp Feature: domain Description: Acetyltransf_1 Location: 128310-128580 bp Feature: gene Location: 128643-130082 bp Feature: domain Description: N6_acetyl_AAC6 Location: 128655-129105 bp Feature: domain Description: N6_acetyl_AAC6 Location: 128655-129105 bp Feature: domain Description: APH_ChoK_like Location: 129255-129882 bp Feature: domain Description: APH_ChoK_like Location: 129255-129882 bp Feature: gene Location: 130159-130461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeiB (COG2311), RVT-UG2, Acetyltransf_1 (pfam00583), N6_acetyl_AAC6 (TIGR04431), APH_ChoK_like (cd05120)

Seq: PEPX01000090.1 Staphylococcus pseudintermedius strain 2130327043011 213032704301-1_90_length_326_cov_442.524_ID_179, whole genome shotgun sequence (326 bp)
Overview 1 RT 1: 26-326 bp Neighborhood of RT #1 [26, 325] RVT-GII Feature: gene Location: 26-325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251-326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251-326 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PEPX01000089.1 Staphylococcus pseudintermedius strain 2130327043011 213032704301-1_91_length_326_cov_730.631_ID_181, whole genome shotgun sequence (326 bp)
Overview 1 RT 1: 26-326 bp Neighborhood of RT #1 [26, 325] RVT-GII Feature: gene Location: 26-325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251-326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251-326 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII