myRT

myRT report for GCA_002768835.1_ASM276883v1

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Seq: BESF01000153.1 Escherichia coli O26:H11 EH2035 DNA, scaffold153, whole genome shotgun sequence (78148 bp)
Overview 1 RT 1: 64177-67962 bp Neighborhood of RT #1 [64177, 67962] DUF932 RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 64177-64422 bp Feature: gene Location: 64422-64808 bp Feature: domain Description: DUF932 Location: 64428-64773 bp Feature: domain Description: DUF932 Location: 64428-64773 bp Feature: gene Location: 64981-66759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65242-66037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65242-66037 bp Feature: domain Description: Intron_maturas2 Location: 66163-66388 bp Feature: domain Description: Intron_maturas2 Location: 661 63-66388 bp Feature: domain Description: HNHc Note: nucleases Location: 66583-66733 bp Feature: domain Description: HNHc Note: nucleases Location: 66583-66733 bp Feature: gene Location: 67251-67649 bp Feature: domain Description: DUF932 Location: 67362-67641 bp Feature: domain Description: DUF932 Location: 67362-67641 bp Feature: gene Location: 67669-67962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: BESF01000292.1 Escherichia coli O26:H11 EH2035 DNA, scaffold292, whole genome shotgun sequence (2654 bp)
Overview 1 RT 1: 90-2172 bp Neighborhood of RT #1 [90, 2417] PHA02517 RVT-GII GIIM Feature: gene Location: 90-302 bp Feature: domain Description: PHA02517 Location: 93-237 bp Feature: domain Description: PHA02 517 Location: 93-2 37 bp Feature: gene Location: 894-2417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1167-1899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1167-1899 bp Feature: domain Description: GIIM Note: maturase Location: 1974-2172 bp Feature: domain Description: GIIM Note: maturase Location: 1974-2 172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)