myRT

myRT report for GCA_002770975.1_ASM277097v1

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Seq: PCUK01000075.1 Bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26 CG18_scaffold_24239_c, whole genome shotgun sequence (4218 bp)
Overview 1 RT 1: 1237-3730 bp Neighborhood of RT #1 [1237, 4092] COG3547 RVT-GII Feature: gene Location: 1237-1878 bp Feature: domain Description: COG3547 Location: 1588-1723 bp Feature: domain Description: COG3547 Location: 1 588-1 723 bp Feature: gene Location: 2514-2663 bp Feature: gene Location: 2755-4092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3037-3730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3037-3730 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: PCUK01000098.1 Bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26 CG18_scaffold_5894_c, whole genome shotgun sequence (5710 bp)
Overview 1 RT 1: 111-5531 bp Neighborhood of RT #1 [111, 5707] L1-EN RVT-CRISPR-like zf-DNL Feature: gene Location: 111-1526 bp Feature: gene Location: 1520-4960 bp Feature: domain Description: L1-EN Location: 1550-2168 bp Feature: domain Description: L1-EN Location: 1550-2 168 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3002-3671 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3002 -3671 bp Feature: gene Location: 5348-5707 bp Feature: domain Description: zf-DNL Location: 5354-5531 bp Feature: domain Description: zf-DNL Location: 5354-5531 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: PCUK01000088.1 Bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26 CG18_scaffold_67_c, whole genome shotgun sequence (83555 bp)
Overview 1 RT 1: 2243-9622 bp Neighborhood of RT #1 [2243, 9622] TPR YfmG RVT-Retrons YbjD Feature: gene Location: 2243-4444 bp Feature: domain Description: TPR Location: 2732-3164 bp Feature: domain Description: TPR Location: 273 2-3 164 bp Feature: domain Description: YfmG Location: 3839-4340 bp Feature: domain Description: YfmG Location: 3 83 9-43 40 bp Feature: gene Location: 4885-5082 bp Feature: gene Location: 5137-6261 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5308-5872 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 53 08-5872 bp Feature: gene Location: 6445-8502 bp Feature: domain Description: YbjD Location: 6448-7771 bp Feature: domain Description: YbjD Location: 6448-7771 bp Feature: gene Location: 9377-9622 bp Sorry, your browser does not support inline SVG.
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