myRT

myRT report for GCA_002776355.1_ASM277635v1

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Seq: NWCA01000016.1 Klebsiella pneumoniae strain AUH_IMP459 NODE_16_length_151764_cov_15.6779_ID_3124, whole genome shotgun sequence (151764 bp)
Overview 1 RT 1: 112871-119739 bp Neighborhood of RT #1 [112871, 119741] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112871-113599 bp Feature: domain Description: FimC Location: 112919-113582 bp Feature: domain Description: FimC Location: 1 1 291 9-1 1 3582 bp Feature: gene Location: 113631-116240 bp Feature: domain Description: FimD Location: 113688-116229 bp Feature: domain Description: FimD Location: 1 1 3688-1 1 6229 bp Feature: gene Location: 116240-118318 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116648-117092 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6648-1 1 7092 bp Feature: gene Location: 118375-118815 bp Feature: domain Description: Integrase_1 Location: 118381-118597 bp Feature: domain Description: Integrase_1 Location: 1 1 8381 -1 1 8597 bp Feature: gene Location: 119076-119741 bp Feature: domain Description: INT_P4_C Location: 119181-119739 bp Feature: domain Description: INT_P4_C Location: 1 1 91 81 -1 1 9739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: NWCA01000019.1 Klebsiella pneumoniae strain AUH_IMP459 NODE_19_length_110849_cov_37.3784_ID_3130, whole genome shotgun sequence (110849 bp)
Overview 1 RT 1: 20005-23213 bp Neighborhood of RT #1 [20005, 23213] PRK10276 RVT-GII Feature: gene Location: 20005-20430 bp Feature: domain Description: PRK10276 Location: 20008-20416 bp Feature: domain Description: PRK102 76 Location: 2 0008-2 0416 bp Feature: gene Location: 20548-20781 bp Feature: gene Location: 20832-22367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21237-21975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 12 37-2 1975 bp Feature: gene Location: 22601-22831 bp Feature: gene Location: 22890-23213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: NWCA01000035.1 Klebsiella pneumoniae strain AUH_IMP459 NODE_35_length_26748_cov_39.2448_ID_3160, whole genome shotgun sequence (26748 bp)
Overview 1 RT 1: 12717-16277 bp Neighborhood of RT #1 [12717, 16277] Tra5 RVT-GII GIIM Feature: gene Location: 12717-13406 bp Feature: domain Description: Tra5 Location: 12822-13248 bp Feature: domain Description: Tra5 Location: 12822-13 248 bp Feature: gene Location: 13558-13743 bp Feature: gene Location: 13830-15353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14103-14835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14103 -1483 5 bp Feature: domain Description: GIIM Note: maturase Location: 14910-15108 bp Feature: domain Description: GIIM Note: maturase Location: 14910-15108 bp Feature: gene Location: 15647-16084 bp Feature: gene Location: 16089-16277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388)