myRT

myRT report for GCA_002777325.1_ASM277732v1

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Seq: MDUZ01000050.1 Snodgrassella alvi strain Pens2-2-5 1196083.22_NODE_2, whole genome shotgun sequence (216308 bp)
Overview 1 RT 1: 98757-104242 bp Neighborhood of RT #1 [98757, 104391] PRK13506 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 98757-98927 bp Feature: gene Location: 98958-100664 bp Feature: domain Description: PRK13506 Location: 98967-100659 bp Feature: domain Description: PRK1 3506 Location: 98967-1 00659 bp Feature: gene Location: 101157-102095 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101259-101865 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 01 259-1 01 865 bp Feature: gene Location: 102098-103741 bp Feature: domain Description: COG3950 Location: 102338-103727 bp Feature: domain Description: COG3950 Location: 1 02338-1 03727 bp Feature: gene Location: 103756-104391 bp Feature: domain Description: TIGR02646 Location: 103822-104242 bp Feature: domain Description: TIGR02646 Location: 1 03822-1 04242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13506 (formate--tetrahydrofolate ligase; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: MDUZ01000087.1 Snodgrassella alvi strain Pens2-2-5 1196083.22_NODE_4, whole genome shotgun sequence (188731 bp)
Overview 1 RT 1: 74570-76329 bp Neighborhood of RT #1 [74570, 76329] HTH_3 RVT-Retrons Feature: gene Location: 74570-74794 bp Feature: gene Location: 74832-75113 bp Feature: domain Description: HTH_3 Location: 74853-75015 bp Feature: domain Description: HTH_3 Location: 74853-75015 bp Feature: gene Location: 75106-75720 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 75247-75709 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 752 47-75709 bp Feature: gene Location: 75747-76160 bp Feature: gene Location: 76171-76329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_3 (pfam01381), RVT-Retrons

Seq: MDUZ01000125.1 Snodgrassella alvi strain Pens2-2-5 1196083.22_NODE_8, whole genome shotgun sequence (102952 bp)
Overview 1 RT 1: 76549-84514 bp Neighborhood of RT #1 [76549, 84516] M48_Ste24p_like RVT-UG8 RVT-UG3 TenA PRK04325 Feature: gene Location: 76549-76680 bp Feature: gene Location: 76911-78839 bp Feature: domain Description: M48_Ste24p_like Location: 77448-78135 bp Feature: domain Description: M48_Ste24p_like Location: 77448-7813 5 bp Feature: gene Location: 79456-81468 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 79981-80425 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 79981-80425 bp Feature: gene Location: 81475-82737 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 81766-82273 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 81766-82273 bp Feature: gene Location: 82972-83634 bp Feature: domain Description: TenA Location: 82978-83626 bp Feature: domain Description: TenA Location: 82978-83 626 bp Feature: gene Location: 84277-84516 bp Feature: domain Description: PRK04325 Location: 84301-84514 bp Feature: domain Description: PRK043 25 Location: 843 01-84514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M48_Ste24p_like (cd07328), RVT-UG8, RVT-UG3, TenA (COG0819), PRK04325 (hypothetical protein; Provisional)