myRT

myRT report for GCA_002777485.1_ASM277748v1

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Seq: MDVF01000038.1 Snodgrassella alvi strain Fer2-2 1196083.53_ctg7180000002686, whole genome shotgun sequence (299989 bp)
Overview 1 RT 1: 284801-290168 bp Neighborhood of RT #1 [284801, 290168] TIGR02646 COG3950 RVT-Retrons PRK13506 Feature: gene Location: 284801-285148 bp Feature: domain Description: TIGR02646 Location: 284906-285032 bp Feature: domain Description: TIGR02646 Location: 284906-285032 bp Feature: gene Location: 285152-286810 bp Feature: domain Description: COG3950 Location: 285392-286778 bp Feature: domain Description: COG3950 Location: 285392-286778 bp Feature: gene Location: 286821-287750 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 286923-287529 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 286923-287529 bp Feature: gene Location: 288245-289951 bp Feature: domain Description: PRK13506 Location: 288254-289946 bp Feature: domain Description: PRK1 3506 Location: 288254-289946 bp Feature: gene Location: 290013-290168 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK13506 (formate--tetrahydrofolate ligase; Provisional)

Seq: MDVF01000040.1 Snodgrassella alvi strain Fer2-2 1196083.53_ctg7180000002688, whole genome shotgun sequence (109723 bp)
Overview 1 RT 1: 56273-64240 bp 2 RT 2: 90662-98926 bp Neighborhood of RT #1 [56273, 64242] M48_Ste24p_like RVT-UG8 RVT-UG3 TenA PRK04325 Neighborhood of RT #2 [90662, 98937] PaaY Dcp Dcp RVT-UG5 nitrilase PRK10416 PepE Feature: gene Location: 56273-56500 bp Feature: gene Location: 56654-58582 bp Feature: domain Description: M48_Ste24p_like Location: 57170-57881 bp Feature: domain Description: M48_Ste2 4p_like Location: 57170-57881 bp Feature: gene Location: 59200-61206 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 59725-60169 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 5972 5-60169 bp Feature: gene Location: 61213-62502 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 61504-62038 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 61504-62 038 bp Feature: gene Location: 62738-63400 bp Feature: domain Description: TenA Location: 62744-63392 bp Feature: domain Description: TenA Location: 62 744-63392 bp Feature: gene Location: 64003-64242 bp Feature: domain Description: PRK04325 Location: 64027-64240 bp Feature: domain Description: PRK0432 5 Location: 6402 7-642 40 bp Feature: gene Location: 90662-91201 bp Feature: domain Description: PaaY Location: 90674-91190 bp Feature: domain Description: PaaY Location: 90674-91190 bp Feature: gene Location: 91220-93430 bp Feature: domain Description: Dcp Location: 91325-91922 bp Feature: domain Description: Dcp Location: 9132 5-9192 2 bp Feature: domain Description: Dcp Location: 91934-93419 bp Feature: domain Description: Dcp Location: 91934-93419 bp Feature: gene Location: 93631-96687 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 94123-94642 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 9412 3-94642 bp Feature: domain Description: nitrilase Location: 96001-96613 bp Feature: domain Description: nitrilase Location: 96001-96613 bp Feature: gene Location: 96846-98138 bp Feature: domain Description: PRK10416 Location: 96897-98133 bp Feature: domain Description: PRK10416 Location: 96897-98133 bp Feature: gene Location: 98323-98937 bp Feature: domain Description: PepE Location: 98326-98926 bp Feature: domain Description: PepE Location: 9832 6-9892 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M48_Ste24p_like (cd07328), RVT-UG8, RVT-UG3, TenA (COG0819), PRK04325 (hypothetical protein; Provisional), PaaY (TIGR02287), Dcp (COG0339), RVT-UG5, nitrilase (cl11424), PRK10416 (signal recognition particle-docking protein FtsY; Provisional)
PepE (COG3340)