myRT

myRT report for GCA_002777495.1_ASM277749v1

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Seq: MDVG01000048.1 Snodgrassella alvi strain Fer4-2 1196083.54_ctg2834, whole genome shotgun sequence (286131 bp)
Overview 1 RT 1: 149396-151157 bp 2 RT 2: 281149-285676 bp Neighborhood of RT #1 [149396, 151157] RVT-Retrons HTH_3 Neighborhood of RT #2 [281149, 285726] RVT-UG2 RVT-UG2 arabinose_DH_like HTH_Tnp_1 Feature: gene Location: 149396-149554 bp Feature: gene Location: 149565-149792 bp Feature: gene Location: 149796-150524 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 149841-150396 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 49841 -1 50396 bp Feature: gene Location: 150614-150895 bp Feature: domain Description: HTH_3 Location: 150635-150797 bp Feature: domain Description: HTH_3 Location: 1 50635-1 50797 bp Feature: gene Location: 150933-151157 bp Feature: gene Location: 281149-281331 bp Feature: gene Location: 281418-282008 bp Feature: gene Location: 282093-282650 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 282096-282309 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 282096-282309 bp Feature: gene Location: 282795-283766 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 283314-283755 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 28331 4-283755 bp Feature: gene Location: 283937-285010 bp Feature: domain Description: arabinose_DH_like Location: 283979-285008 bp Feature: domain Description: arabinose_DH_like Location: 283979-285008 bp Feature: gene Location: 285469-285726 bp Feature: domain Description: HTH_Tnp_1 Location: 285481-285676 bp Feature: domain Description: HTH_Tnp_1 Location: 285481 -285676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_3 (pfam01381), RVT-UG2, arabinose_DH_like (cd05284), HTH_Tnp_1 (pfam01527)

Seq: MDVG01000059.1 Snodgrassella alvi strain Fer4-2 1196083.54_ctg2848, whole genome shotgun sequence (243813 bp)
Overview 1 RT 1: 92584-94345 bp Neighborhood of RT #1 [92584, 94345] HTH_3 RVT-Retrons Feature: gene Location: 92584-92808 bp Feature: gene Location: 92846-93127 bp Feature: domain Description: HTH_3 Location: 92867-93029 bp Feature: domain Description: HTH_3 Location: 92 867-9302 9 bp Feature: gene Location: 93217-93945 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 93262-93817 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 932 62 -93817 bp Feature: gene Location: 93949-94176 bp Feature: gene Location: 94187-94345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_3 (pfam01381), RVT-Retrons

Seq: MDVG01000066.1 Snodgrassella alvi strain Fer4-2 1196083.54_ctg2857, whole genome shotgun sequence (243753 bp)
Overview 1 RT 1: 149409-151170 bp Neighborhood of RT #1 [149409, 151170] RVT-Retrons HTH_3 Feature: gene Location: 149409-149567 bp Feature: gene Location: 149578-149805 bp Feature: gene Location: 149809-150537 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 149854-150409 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 149854-150409 bp Feature: gene Location: 150627-150908 bp Feature: domain Description: HTH_3 Location: 150648-150810 bp Feature: domain Description: HTH_3 Location: 150648-150810 bp Feature: gene Location: 150946-151170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_3 (pfam01381)