myRT

myRT report for GCA_002777675.1_ASM277767v1

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Seq: MEIP01000012.1 Snodgrassella alvi strain Ruf1-X 1196083.64_ctg7180000000746, whole genome shotgun sequence (212646 bp)
Overview 1 RT 1: 196294-201980 bp Neighborhood of RT #1 [196294, 201980] TIGR02646 COG3950 RVT-Retrons PRK13506 Feature: gene Location: 196294-196971 bp Feature: domain Description: TIGR02646 Location: 196402-196774 bp Feature: domain Description: TIGR02646 Location: 1 96402-1 96774 bp Feature: gene Location: 196975-198621 bp Feature: domain Description: COG3950 Location: 197215-198589 bp Feature: domain Description: COG3950 Location: 1 9721 5-1 98589 bp Feature: gene Location: 198624-199562 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 198726-199332 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 98726-1 99332 bp Feature: gene Location: 200057-201763 bp Feature: domain Description: PRK13506 Location: 200066-201758 bp Feature: domain Description: PRK1 3506 Location: 200066-201 758 bp Feature: gene Location: 201825-201980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK13506 (formate--tetrahydrofolate ligase; Provisional)

Seq: MEIP01000014.1 Snodgrassella alvi strain Ruf1-X 1196083.64_ctg7180000000748, whole genome shotgun sequence (451901 bp)
Overview 1 RT 1: 353745-357256 bp Neighborhood of RT #1 [353745, 357256] CcmA NosY RVT-Retrons HTH_XRE Feature: gene Location: 353745-354689 bp Feature: domain Description: CcmA Location: 353769-354657 bp Feature: domain Description: CcmA Location: 353769-354657 bp Feature: gene Location: 354686-355486 bp Feature: domain Description: NosY Location: 354695-355472 bp Feature: domain Description: NosY Location: 354695-355472 bp Feature: gene Location: 355665-356720 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 355806-356376 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 355806-356376 bp Feature: gene Location: 356713-356994 bp Feature: domain Description: HTH_XRE Location: 356725-356893 bp Feature: domain Description: HTH_XRE Location: 35672 5-356893 bp Feature: gene Location: 357032-357256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcmA (COG4133), NosY (COG1277), RVT-Retrons, HTH_XRE (smart00530)

Seq: MEIP01000028.1 Snodgrassella alvi strain Ruf1-X 1196083.64_ctg7180000000763, whole genome shotgun sequence (127673 bp)
Overview 1 RT 1: 44158-52172 bp Neighborhood of RT #1 [44158, 52172] PRK04325 TenA RVT-UG3 RVT-UG8 M48_Ste24p_like Feature: gene Location: 44158-44397 bp Feature: domain Description: PRK04325 Location: 44182-44395 bp Feature: domain Description: PRK043 25 Location: 44182-443 95 bp Feature: gene Location: 45043-45705 bp Feature: domain Description: TenA Location: 45049-45697 bp Feature: domain Description: TenA Location: 45049-45697 bp Feature: gene Location: 45941-47230 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 46232-46766 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 4623 2-46766 bp Feature: gene Location: 47237-49243 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 47762-48206 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 47762-48206 bp Feature: gene Location: 49862-51790 bp Feature: domain Description: M48_Ste24p_like Location: 50378-51089 bp Feature: domain Description: M48_Ste24p_like Location: 503 78-51089 bp Feature: gene Location: 51945-52172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK04325 (hypothetical protein; Provisional), TenA (COG0819), RVT-UG3, RVT-UG8, M48_Ste24p_like (cd07328)