myRT

myRT report for GCA_002777795.1_ASM277779v1

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Seq: MEIT01000084.1 Snodgrassella alvi strain HK9x 1196083.59_ctg7180000000497, whole genome shotgun sequence (272954 bp)
Overview 1 RT 1: 168401-174035 bp Neighborhood of RT #1 [168401, 174035] TIGR02646 COG3950 RVT-Retrons PRK13506 Feature: gene Location: 168401-169036 bp Feature: domain Description: TIGR02646 Location: 168467-168887 bp Feature: domain Description: TIGR02646 Location: 1 68467-1 68887 bp Feature: gene Location: 169051-170694 bp Feature: domain Description: COG3950 Location: 169291-170680 bp Feature: domain Description: COG3950 Location: 1 69291 -1 70680 bp Feature: gene Location: 170697-171635 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 170799-171405 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 70799-1 71 405 bp Feature: gene Location: 172128-173834 bp Feature: domain Description: PRK13506 Location: 172137-173829 bp Feature: domain Description: PRK1 3506 Location: 1 721 37-1 73829 bp Feature: gene Location: 173865-174035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK13506 (formate--tetrahydrofolate ligase; Provisional)

Seq: MEIT01000089.1 Snodgrassella alvi strain HK9x 1196083.59_ctg7180000000502, whole genome shotgun sequence (120216 bp)
Overview 1 RT 1: 43185-44944 bp Neighborhood of RT #1 [43185, 44944] RVT-Retrons HTH_3 Feature: gene Location: 43185-43343 bp Feature: gene Location: 43354-43767 bp Feature: gene Location: 43794-44408 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43935-44397 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43935-44397 bp Feature: gene Location: 44401-44682 bp Feature: domain Description: HTH_3 Location: 44422-44584 bp Feature: domain Description: HTH_3 Location: 4442 2 -44584 bp Feature: gene Location: 44720-44944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_3 (pfam01381)

Seq: MEIT01000091.1 Snodgrassella alvi strain HK9x 1196083.59_ctg7180000000504, whole genome shotgun sequence (90824 bp)
Overview 1 RT 1: 24630-32597 bp Neighborhood of RT #1 [24630, 32597] PRK04325 TenA RVT-UG3 RVT-UG8 M48_Ste24p_like Feature: gene Location: 24630-24869 bp Feature: domain Description: PRK04325 Location: 24654-24867 bp Feature: domain Description: PRK043 25 Location: 24654-24867 bp Feature: gene Location: 25512-26174 bp Feature: domain Description: TenA Location: 25518-26166 bp Feature: domain Description: TenA Location: 25518-26166 bp Feature: gene Location: 26409-27671 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 26700-27207 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 26700-27207 bp Feature: gene Location: 27678-29690 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 28203-28647 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 28203 -28647 bp Feature: gene Location: 30307-32235 bp Feature: domain Description: M48_Ste24p_like Location: 30844-31531 bp Feature: domain Description: M48_Ste24p_like Location: 3 0844-3 153 1 bp Feature: gene Location: 32466-32597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK04325 (hypothetical protein; Provisional), TenA (COG0819), RVT-UG3, RVT-UG8, M48_Ste24p_like (cd07328)