myRT

myRT report for GCA_002778735.1_ASM277873v1

Download annotations/find similar RTs

Seq: PEZV01000034.1 Candidatus Berkelbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_41_12 CG10_8_21_14_0.10_scaffold_12290_c, whole genome shotgun sequence (7076 bp)
Overview 1 RT 1: 4189-7076 bp Neighborhood of RT #1 [4189, 7075] 4 4 RVT-UG13 xseA Feature: gene Location: 4189-4593 bp Feature: domain Description: 4 Location: 4249-4429 bp Feature: domain Description: 4 Location: 4249-4429 bp Feature: domain Description: 4 Location: 4450-4537 bp Feature: domain Description: 4 Location: 4450-4537 bp Feature: gene Location: 4630-5349 bp Feature: gene Location: 5404-6729 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 5794-6277 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 5794-6277 bp Feature: gene Location: 6764-7075 bp Feature: domain Description: xseA Location: 6773-7076 bp Feature: domain Description: xseA Location: 6773-7076 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 4 (PHA02552), RVT-UG13, xseA (TIGR00237)

Seq: PEZV01000036.1 Candidatus Berkelbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_41_12 CG10_8_21_14_0.10_scaffold_1762_c, whole genome shotgun sequence (23297 bp)
Overview 1 RT 1: 11693-15197 bp Neighborhood of RT #1 [11693, 15214] Avd_like RVT-DGRs uvrC uvrC COG1430 Feature: gene Location: 11693-11830 bp Feature: gene Location: 12016-12402 bp Feature: domain Description: Avd_like Location: 12067-12373 bp Feature: domain Description: Avd_like Location: 12 067-12 373 bp Feature: gene Location: 12460-13386 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12595-13207 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12 595-132 07 bp Feature: gene Location: 13522-14709 bp Feature: domain Description: uvrC Location: 13537-14257 bp Feature: domain Description: uvrC Location: 13537-142 57 bp Feature: domain Description: uvrC Location: 14278-14707 bp Feature: domain Description: uvrC Location: 142 78-14707 bp Feature: gene Location: 14768-15214 bp Feature: domain Description: COG1430 Location: 14867-15197 bp Feature: domain Description: COG1430 Location: 14867-15197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, uvrC (TIGR00194), COG1430 (Uncharacterized conserved membrane protein, UPF0127 family )

Seq: PEZV01000014.1 Candidatus Berkelbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_41_12 CG10_8_21_14_0.10_scaffold_9106_c, whole genome shotgun sequence (9379 bp)
Overview 1 RT 1: 321-4127 bp Neighborhood of RT #1 [321, 4129] Avd_like RVT-DGRs RVT-DGRs Bac_DNA_binding Feature: gene Location: 321-797 bp Feature: gene Location: 1255-1608 bp Feature: domain Description: Avd_like Location: 1261-1564 bp Feature: domain Description: Avd_like Location: 1261-1564 bp Feature: gene Location: 1651-2247 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1852-2188 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1852-2188 bp Feature: gene Location: 2249-2686 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2261-2534 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2261-253 4 bp Feature: gene Location: 2861-3508 bp Feature: gene Location: 3836-4129 bp Feature: domain Description: Bac_DNA_binding Location: 3872-4127 bp Feature: domain Description: Bac_DNA_binding Location: 3 872-4127 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Bac_DNA_binding (pfam00216)