myRT

myRT report for GCA_002779175.1_ASM277917v1

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Seq: PEXG01000098.1 Actinobacteria bacterium CG08_land_8_20_14_0_20_50_39 CG08_land_8_20_14_0.20_scaffold_1053_c, whole genome shotgun sequence (22417 bp)
Overview 1 RT 1: 17906-22257 bp Neighborhood of RT #1 [17906, 22257] COG4584 PRK09183 RVT-GII GIIM Feature: gene Location: 17906-19390 bp Feature: domain Description: COG4584 Location: 17909-18776 bp Feature: domain Description: COG4584 Location: 1 7909-1 8776 bp Feature: gene Location: 19392-20114 bp Feature: domain Description: PRK09183 Location: 19458-20100 bp Feature: domain Description: PRK091 83 Location: 1 9458-201 00 bp Feature: gene Location: 20286-21896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20838-21453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20838-21 453 bp Feature: domain Description: GIIM Note: maturase Location: 21507-21723 bp Feature: domain Description: GIIM Note: maturase Location: 21 507-21 723 bp Feature: gene Location: 22108-22257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), PRK09183 (transposase/IS protein; Provisional), RVT-GII, GIIM (pfam08388)

Seq: PEXG01000055.1 Actinobacteria bacterium CG08_land_8_20_14_0_20_50_39 CG08_land_8_20_14_0.20_scaffold_12524_c, whole genome shotgun sequence (5799 bp)
Overview 1 RT 1: 206-5340 bp Neighborhood of RT #1 [206, 5396] CRISPR_Cas6 Cas1_I-II-III RVT-CRISPR cas4 cas1_CYANO CRISPR_Cas2 Feature: gene Location: 206-1159 bp Feature: domain Description: CRISPR_Cas6 Location: 782-1148 bp Feature: domain Description: CRISPR_Cas6 Location: 782 -1148 bp Feature: gene Location: 1181-2188 bp Feature: domain Description: Cas1_I-II-III Location: 1193-2150 bp Feature: domain Description: Cas1_I-II-III Location: 1193-2 150 bp Feature: gene Location: 2365-4065 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2596-3199 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 596-3199 bp Feature: domain Description: cas4 Location: 3469-4003 bp Feature: domain Description: cas4 Location: 3469-4003 bp Feature: gene Location: 4126-5118 bp Feature: domain Description: cas1_CYANO Location: 4135-5113 bp Feature: domain Description: cas1_CYANO Location: 4135-5113 bp Feature: gene Location: 5124-5396 bp Feature: domain Description: CRISPR_Cas2 Location: 5127-5340 bp Feature: domain Description: CRISPR_Cas2 Location: 512 7-5340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas6 (pfam10040), Cas1_I-II-III (cl00656), RVT-CRISPR, cas4 (TIGR00372), cas1_CYANO (TIGR04093), CRISPR_Cas2 (pfam09827)