myRT

myRT report for GCA_002781905.1_ASM278190v1

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Seq: PFGI01000033.1 Zetaproteobacteria bacterium CG12_big_fil_rev_8_21_14_0_65_54_13 CG12_8_21_14_0.65_scaffold_2381_c, whole genome shotgun sequence (10918 bp)
Overview 1 RT 1: 5548-10460 bp Neighborhood of RT #1 [5548, 10561] asn_synth_AEB RVT-UG4 RVT-GII GIIM Feature: gene Location: 5548-6063 bp Feature: gene Location: 6060-7973 bp Feature: domain Description: asn_synth_AEB Location: 6114-7749 bp Feature: domain Description: asn_synth_AEB Location: 61 1 4-7749 bp Feature: gene Location: 7948-8826 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 8137-8584 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 81 37-8584 bp Feature: gene Location: 8855-9094 bp Feature: gene Location: 9203-10561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9515-10178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951 5-1 01 78 bp Feature: domain Description: GIIM Note: maturase Location: 10244-10460 bp Feature: domain Description: GIIM Note: maturase Location: 1 0244-1 0460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT asn_synth_AEB (TIGR01536), RVT-UG4, RVT-GII, GIIM (pfam08388)

Seq: PFGI01000153.1 Zetaproteobacteria bacterium CG12_big_fil_rev_8_21_14_0_65_54_13 CG12_8_21_14_0.65_scaffold_765_c, whole genome shotgun sequence (38987 bp)
Overview 1 RT 1: 36788-38985 bp Neighborhood of RT #1 [36788, 38985] YdjM RVT-UG4 Feature: gene Location: 36788-37501 bp Feature: domain Description: YdjM Location: 36791-37277 bp Feature: domain Description: YdjM Location: 36791-372 77 bp Feature: gene Location: 37582-37764 bp Feature: gene Location: 37826-38710 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 38027-38468 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3802 7-38468 bp Feature: gene Location: 38839-38985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdjM (pfam04307), RVT-UG4