myRT

myRT report for GCA_002782725.1_ASM278272v1

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Seq: PFIQ01001033.1 Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 CG_4_8_14_3_um_filter_scaffold_10753_c, whole genome shotgun sequence (9541 bp)
Overview 1 RT 1: 2-2197 bp Neighborhood of RT #1 [2, 2197] RVT-DGRs Feature: gene Location: 2-166 bp Feature: gene Location: 512-901 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 623-743 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 623-743 bp Feature: gene Location: 1340-1843 bp Feature: gene Location: 1859-2197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: PFIQ01000422.1 Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 CG_4_8_14_3_um_filter_scaffold_11532_c, whole genome shotgun sequence (4520 bp)
Overview 1 RT 1: 89-4442 bp Neighborhood of RT #1 [89, 4456] RVT-DGRs ClpA ClpA Yop-YscD_cpl Feature: gene Location: 89-1159 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 296-941 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 96-941 bp Feature: gene Location: 1765-4077 bp Feature: domain Description: ClpA Location: 1789-3013 bp Feature: domain Description: ClpA Location: 1789-3013 bp Feature: domain Description: ClpA Location: 3052-4048 bp Feature: domain Description: ClpA Location: 3052 -4048 bp Feature: gene Location: 4148-4456 bp Feature: domain Description: Yop-YscD_cpl Location: 4181-4442 bp Feature: domain Description: Yop-YscD_cpl Location: 4181-4442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, ClpA (TIGR02639), Yop-YscD_cpl (pfam16697)

Seq: PFIQ01000947.1 Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 CG_4_8_14_3_um_filter_scaffold_14872_c, whole genome shotgun sequence (3739 bp)
Overview 1 RT 1: 2061-3535 bp Neighborhood of RT #1 [2061, 3738] YiaG RVT-DGRs Feature: gene Location: 2061-2384 bp Feature: domain Description: YiaG Location: 2172-2355 bp Feature: domain Description: YiaG Location: 2172-23 55 bp Feature: gene Location: 2347-2721 bp Feature: gene Location: 3217-3738 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3262-3535 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 262-3 53 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YiaG (COG2944), RVT-DGRs

Seq: PFIQ01000867.1 Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 CG_4_8_14_3_um_filter_scaffold_19582_c, whole genome shotgun sequence (3059 bp)
Overview 1 RT 1: 131-2981 bp Neighborhood of RT #1 [131, 3019] HRDC RVT-DGRs YfmG Feature: gene Location: 131-613 bp Feature: domain Description: HRDC Location: 380-569 bp Feature: domain Description: HRDC Location: 380-569 bp Feature: gene Location: 744-2132 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 798-1554 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 798-1554 bp Feature: gene Location: 2129-3019 bp Feature: domain Description: YfmG Location: 2258-2981 bp Feature: domain Description: YfmG Location: 2258-2981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HRDC (smart00341), RVT-DGRs, YfmG (COG1262)

Seq: PFIQ01000650.1 Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 CG_4_8_14_3_um_filter_scaffold_21138_c, whole genome shotgun sequence (2936 bp)
Overview 1 RT 1: 3-2703 bp Neighborhood of RT #1 [3, 2703] RVT-DGRs Avd_like Feature: gene Location: 3-614 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 276-606 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 276-606 bp Feature: gene Location: 1025-1444 bp Feature: domain Description: Avd_like Location: 1052-1358 bp Feature: domain Description: Avd_like Location: 105 2-135 8 bp Feature: gene Location: 2098-2703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: PFIQ01000194.1 Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 CG_4_8_14_3_um_filter_scaffold_2603_c, whole genome shotgun sequence (12223 bp)
Overview 1 RT 1: 400-5243 bp Neighborhood of RT #1 [400, 5284] Avd_like Avd_like RVT-DGRs RVT-DGRs NT_KNTase_like DUF4058 Feature: gene Location: 400-819 bp Feature: domain Description: Avd_like Location: 433-739 bp Feature: domain Description: Avd_like Location: 433-739 bp Feature: gene Location: 896-1315 bp Feature: domain Description: Avd_like Location: 929-1235 bp Feature: domain Description: Avd_like Location: 929-1235 bp Feature: gene Location: 1980-3176 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2205-2328 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2205-2328 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2427-2943 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2427-2943 bp Feature: gene Location: 3691-4203 bp Feature: domain Description: NT_KNTase_like Location: 3742-3892 bp Feature: domain Description: NT_KNTase_like Location: 3742-3892 bp Feature: gene Location: 4487-5284 bp Feature: domain Description: DUF4058 Location: 4490-5243 bp Feature: domain Description: DUF4058 Location: 4490-5243 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, NT_KNTase_like (cd05403), DUF4058 (pfam13267)

Seq: PFIQ01000776.1 Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 CG_4_8_14_3_um_filter_scaffold_3879_c, whole genome shotgun sequence (8863 bp)
Overview 1 RT 1: 1847-7678 bp Neighborhood of RT #1 [1847, 7752] nirV Hrd RVT-DGRs DUF4091 COG2865 Feature: gene Location: 1847-2011 bp Feature: domain Description: nirV Location: 1865-1991 bp Feature: domain Description: nirV Location: 1865-1991 bp Feature: gene Location: 2178-2657 bp Feature: domain Description: Hrd Location: 2415-2622 bp Feature: domain Description: Hrd Location: 2415-2622 bp Feature: gene Location: 2718-3077 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2721-2871 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 27 21-287 1 bp Feature: gene Location: 3876-6365 bp Feature: domain Description: DUF4091 Location: 5901-6111 bp Feature: domain Description: DUF4091 Location: 5901-6111 bp Feature: gene Location: 6586-7752 bp Feature: domain Description: COG2865 Location: 6616-7678 bp Feature: domain Description: COG2865 Location: 6616-7 67 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nirV (LOAD_nirV), Hrd (LOAD_Hrd), RVT-DGRs, DUF4091 (pfam13320), COG2865 (Predicted transcriptional regulator, contains HTH domain )

Seq: PFIQ01000762.1 Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 CG_4_8_14_3_um_filter_scaffold_45849_c, whole genome shotgun sequence (3072 bp)
Overview 1 RT 1: 350-2881 bp Neighborhood of RT #1 [350, 3069] CsgG DUF4384 RVT-DGRs Feature: gene Location: 350-1162 bp Feature: gene Location: 1477-2565 bp Feature: domain Description: CsgG Location: 1708-1885 bp Feature: domain Description: CsgG Location: 1708 -18 8 5 bp Feature: domain Description: DUF4384 Location: 2128-2365 bp Feature: domain Description: DUF438 4 Location: 2128 -2365 bp Feature: gene Location: 2707-3069 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2710-2881 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2710-28 8 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CsgG (pfam03783), DUF4384 (pfam14326), RVT-DGRs

Seq: PFIQ01000461.1 Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 CG_4_8_14_3_um_filter_scaffold_56150_c, whole genome shotgun sequence (1479 bp)
Overview 1 RT 1: 3-1421 bp Neighborhood of RT #1 [3, 1477] pfam03781 Avd_like RVT-DGRs RVT-DGRs Feature: gene Location: 3-269 bp Feature: domain Description: pfam03781 Location: 12-246 bp Feature: domain Description: pfam03781 Location: 12-246 bp Feature: gene Location: 372-806 bp Feature: domain Description: Avd_like Location: 459-762 bp Feature: domain Description: Avd_like Location: 459 -762 bp Feature: gene Location: 896-1477 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1106-1226 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1106-1226 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1319-1421 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1319 -1421 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), Avd_like (cd16376), RVT-DGRs

Seq: PFIQ01001035.1 Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 CG_4_8_14_3_um_filter_scaffold_6636_c, whole genome shotgun sequence (6419 bp)
Overview 1 RT 1: 2-4665 bp Neighborhood of RT #1 [2, 5123] RVT-DGRs ARS_like Feature: gene Location: 2-646 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5-452 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5-452 bp Feature: gene Location: 693-3146 bp Feature: gene Location: 3183-5123 bp Feature: domain Description: ARS_like Location: 3333-4665 bp Feature: domain Description: ARS_like Location: 3333-4665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, ARS_like (cd16146)

Seq: PFIQ01000787.1 Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 CG_4_8_14_3_um_filter_scaffold_86013_c, whole genome shotgun sequence (1964 bp)
Overview 1 RT 1: 3-1746 bp Neighborhood of RT #1 [3, 1961] FlgT_N RVT-DGRs Feature: gene Location: 3-683 bp Feature: domain Description: FlgT_N Location: 198-456 bp Feature: domain Description: FlgT_N Location: 198-456 bp Feature: gene Location: 752-1069 bp Feature: gene Location: 1089-1961 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1230-1746 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1230-1746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FlgT_N (pfam16548), RVT-DGRs

Seq: PFIQ01000821.1 Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 CG_4_8_14_3_um_filter_scaffold_8650_c, whole genome shotgun sequence (5372 bp)
Overview 1 RT 1: 615-4930 bp Neighborhood of RT #1 [615, 4930] Cas1_I-II-III COG4951 RVT-CRISPR COG4951 STKc_PknB_like Feature: gene Location: 615-1493 bp Feature: domain Description: Cas1_I-II-III Location: 621-1455 bp Feature: domain Description: Cas1_I-II-III Location: 621-1455 bp Feature: gene Location: 1668-2741 bp Feature: domain Description: COG4951 Location: 1674-2022 bp Feature: domain Description: COG4951 Location: 1674-2022 bp Feature: gene Location: 2793-3710 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3033-3303 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3033-3303 bp Feature: domain Description: COG4951 Location: 3570-3705 bp Feature: domain Description: COG4951 Location: 3570-3705 bp Feature: gene Location: 3762-4694 bp Feature: domain Description: STKc_PknB_like Location: 3849-4563 bp Feature: domain Description: STKc_PknB_like Location: 3849-4563 bp Feature: gene Location: 4697-4930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas1_I-II-III (cl00656), COG4951 (Uncharacterized protein ), RVT-CRISPR, STKc_PknB_like (cd14014)