myRT

myRT report for GCA_002782825.1_ASM278282v1

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Seq: PFIX01000023.1 Zetaproteobacteria bacterium CG_4_10_14_3_um_filter_54_28 CG_4_10_14_3_um_filter_scaffold_12238_c, whole genome shotgun sequence (5827 bp)
Overview 1 RT 1: 1-1977 bp Neighborhood of RT #1 [1, 2201] RVT-UG4 YdjM Feature: gene Location: 1-150 bp Feature: gene Location: 279-1163 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 480-921 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 480-921 bp Feature: gene Location: 1225-1407 bp Feature: gene Location: 1488-2201 bp Feature: domain Description: YdjM Location: 1491-1977 bp Feature: domain Description: YdjM Location: 1 491 -1 977 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, YdjM (pfam04307)

Seq: PFIX01000071.1 Zetaproteobacteria bacterium CG_4_10_14_3_um_filter_54_28 CG_4_10_14_3_um_filter_scaffold_160_c, whole genome shotgun sequence (54126 bp)
Overview 1 RT 1: 1-5038 bp Neighborhood of RT #1 [1, 5038] RVT-GII GIIM RVT-UG4 asn_synth_AEB Feature: gene Location: 1-1383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337-1000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337-1000 bp Feature: domain Description: GIIM Note: maturase Location: 1066-1282 bp Feature: domain Description: GIIM Note: maturase Location: 1066-12 82 bp Feature: gene Location: 1492-1731 bp Feature: gene Location: 1760-2638 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1949-2396 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1949-2 396 bp Feature: gene Location: 2613-4526 bp Feature: domain Description: asn_synth_AEB Location: 2667-4302 bp Feature: domain Description: asn_synth_AEB Location: 2 667-4302 bp Feature: gene Location: 4523-5038 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RVT-UG4, asn_synth_AEB (TIGR01536)