myRT

myRT report for GCA_002784845.1_ASM278484v1

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Seq: PFKS01000232.1 Actinobacteria bacterium CG_4_10_14_3_um_filter_50_156 CG_4_10_14_3_um_filter_scaffold_12346_c, whole genome shotgun sequence (6095 bp)
Overview 1 RT 1: 502-5636 bp Neighborhood of RT #1 [502, 5692] CRISPR_Cas6 Cas1_I-II-III RVT-CRISPR cas4 cas1_CYANO CRISPR_Cas2 Feature: gene Location: 502-1455 bp Feature: domain Description: CRISPR_Cas6 Location: 1078-1444 bp Feature: domain Description: CRISPR_Cas6 Location: 1 078-1 444 bp Feature: gene Location: 1477-2484 bp Feature: domain Description: Cas1_I-II-III Location: 1489-2446 bp Feature: domain Description: Cas1 _I-II-III Location: 1 489-2446 bp Feature: gene Location: 2661-4361 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2892-3495 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2892-3495 bp Feature: domain Description: cas4 Location: 3765-4299 bp Feature: domain Description: cas4 Location: 3765-4299 bp Feature: gene Location: 4422-5414 bp Feature: domain Description: cas1_CYANO Location: 4431-5409 bp Feature: domain Description: cas1 _CYANO Location: 4431 -5409 bp Feature: gene Location: 5420-5692 bp Feature: domain Description: CRISPR_Cas2 Location: 5423-5636 bp Feature: domain Description: CRISPR_Cas2 Location: 5423-5636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas6 (pfam10040), Cas1_I-II-III (cl00656), RVT-CRISPR, cas4 (TIGR00372), cas1_CYANO (TIGR04093), CRISPR_Cas2 (pfam09827)

Seq: PFKS01000251.1 Actinobacteria bacterium CG_4_10_14_3_um_filter_50_156 CG_4_10_14_3_um_filter_scaffold_4077_c, whole genome shotgun sequence (22159 bp)
Overview 1 RT 1: 343-3639 bp Neighborhood of RT #1 [343, 4253] RVT-GII GIIM PRK09183 COG4584 Feature: gene Location: 343-1953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 895-1510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 895-1510 bp Feature: domain Description: GIIM Note: maturase Location: 1564-1780 bp Feature: domain Description: GIIM Note: maturase Location: 1564-1780 bp Feature: gene Location: 2132-2767 bp Feature: domain Description: PRK09183 Location: 2198-2738 bp Feature: domain Description: PRK09183 Location: 2 198-2 738 bp Feature: gene Location: 2769-4253 bp Feature: domain Description: COG4584 Location: 2772-3639 bp Feature: domain Description: COG4584 Location: 2 772 -3639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase )