myRT

myRT report for GCA_002785445.1_ASM278544v1

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Seq: PFMQ01000143.1 Elusimicrobia bacterium CG_4_10_14_0_8_um_filter_37_32 CG_4_10_14_0.8_um_filter_scaffold_8379_c, whole genome shotgun sequence (9058 bp)
Overview 1 RT 1: 2-6004 bp Neighborhood of RT #1 [2, 6004] RVT-UG9 AAA Feature: gene Location: 2-145 bp Feature: gene Location: 162-1799 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 387-999 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 387-999 bp Feature: gene Location: 1885-4728 bp Feature: domain Description: AAA Location: 1978-2350 bp Feature: domain Description: AAA Location: 1 978-2350 bp Feature: gene Location: 4730-6004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG9, AAA (TIGR00769)

Seq: PFMQ01000010.1 Elusimicrobia bacterium CG_4_10_14_0_8_um_filter_37_32 CG_4_10_14_0.8_um_filter_scaffold_9192_c, whole genome shotgun sequence (6304 bp)
Overview 1 RT 1: 102-4539 bp Neighborhood of RT #1 [102, 4910] Avd_like RVT-DGRs STKc_PknB_like FHA Feature: gene Location: 102-449 bp Feature: domain Description: Avd_like Location: 129-435 bp Feature: domain Description: Avd_like Location: 12 9-435 bp Feature: gene Location: 470-640 bp Feature: gene Location: 798-1832 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1005-1635 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1005-1635 bp Feature: gene Location: 1847-2788 bp Feature: domain Description: STKc_PknB_like Location: 1997-2765 bp Feature: domain Description: STKc_PknB_like Location: 1997-2 765 bp Feature: gene Location: 2823-4910 bp Feature: domain Description: FHA Location: 4281-4539 bp Feature: domain Description: FHA Location: 42 81-4539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, STKc_PknB_like (cd14014), FHA (smart00240)

Seq: PFMQ01000058.1 Elusimicrobia bacterium CG_4_10_14_0_8_um_filter_37_32 CG_4_10_14_0.8_um_filter_scaffold_9306_c, whole genome shotgun sequence (10105 bp)
Overview 1 RT 1: 6795-9612 bp Neighborhood of RT #1 [6795, 9809] CsgG CsgG YfmG Avd_like RVT-DGRs Feature: gene Location: 6795-8063 bp Feature: domain Description: CsgG Location: 6939-7134 bp Feature: domain Description: CsgG Location: 693 9-713 4 bp Feature: domain Description: CsgG Location: 7143-7221 bp Feature: domain Description: CsgG Location: 7143 -7221 bp Feature: domain Description: YfmG Location: 7293-8046 bp Feature: domain Description: YfmG Location: 7293 -8046 bp Feature: gene Location: 8130-8483 bp Feature: domain Description: Avd_like Location: 8151-8457 bp Feature: domain Description: Avd_like Location: 8151-8457 bp Feature: gene Location: 8814-9809 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9024-9612 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9024-9612 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CsgG (pfam03783), YfmG (COG1262), Avd_like (cd16376), RVT-DGRs