myRT

myRT report for GCA_002786895.1_ASM278689v1

Download annotations/find similar RTs

Seq: PCUX01000073.1 Bdellovibrio sp. CG12_big_fil_rev_8_21_14_0_65_39_13 CG12_8_21_14_0.65_scaffold_209_c, whole genome shotgun sequence (56861 bp)
Overview 1 RT 1: 125-3057 bp Neighborhood of RT #1 [125, 3057] Avd_like RVT-DGRs HTH_XRE HTH_XRE Feature: gene Location: 125-463 bp Feature: domain Description: Avd_like Location: 143-449 bp Feature: domain Description: Avd_like Location: 1 43-449 bp Feature: gene Location: 676-1437 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 682-1297 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 682-1 297 bp Feature: gene Location: 2252-2851 bp Feature: domain Description: HTH_XRE Location: 2288-2441 bp Feature: domain Description: HTH_XRE Location: 2288-2441 bp Feature: domain Description: HTH_XRE Location: 2570-2732 bp Feature: domain Description: HTH_XRE Location: 2570-2732 bp Feature: gene Location: 2929-3057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, HTH_XRE (smart00530)

Seq: PCUX01000090.1 Bdellovibrio sp. CG12_big_fil_rev_8_21_14_0_65_39_13 CG12_8_21_14_0.65_scaffold_3_c, whole genome shotgun sequence (229212 bp)
Overview 1 RT 1: 96534-103295 bp Neighborhood of RT #1 [96534, 103295] SXT_TraD SXT_TraD RVT-UG5 TRX_family Feature: gene Location: 96534-97967 bp Feature: domain Description: SXT_TraD Location: 96786-97194 bp Feature: domain Description: SXT_TraD Location: 96786-97194 bp Feature: domain Description: SXT_TraD Location: 97326-97773 bp Feature: domain Description: SXT_TraD Location: 9732 6-97773 bp Feature: gene Location: 98180-98761 bp Feature: gene Location: 98782-101754 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 99241-99718 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 992 41-99718 bp Feature: gene Location: 102090-102632 bp Feature: domain Description: TRX_family Location: 102288-102534 bp Feature: domain Description: TRX_family Location: 102 2 88-102 534 bp Feature: gene Location: 102672-103295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SXT_TraD (TIGR03743), RVT-UG5, TRX_family (cd02947)

Seq: PCUX01000019.1 Bdellovibrio sp. CG12_big_fil_rev_8_21_14_0_65_39_13 CG12_8_21_14_0.65_scaffold_432_c, whole genome shotgun sequence (37115 bp)
Overview 1 RT 1: 32370-36765 bp Neighborhood of RT #1 [32370, 36765] HTH_17 RVT-DGRs Feature: gene Location: 32370-32528 bp Feature: gene Location: 34020-34658 bp Feature: domain Description: HTH_17 Location: 34044-34176 bp Feature: domain Description: HTH_17 Location: 3 4044-3 4176 bp Feature: gene Location: 34946-35845 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 35174-35807 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 5174-3 5807 bp Feature: gene Location: 35914-36081 bp Feature: gene Location: 36499-36765 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), RVT-DGRs

Seq: PCUX01000053.1 Bdellovibrio sp. CG12_big_fil_rev_8_21_14_0_65_39_13 CG12_8_21_14_0.65_scaffold_48951_c, whole genome shotgun sequence (1754 bp)
Overview 1 RT 1: 2-1753 bp Neighborhood of RT #1 [2, 1753] RVT-DGRs Feature: gene Location: 2-235 bp Feature: gene Location: 567-1544 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 768-1404 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 768-14 04 bp Feature: gene Location: 1541-1753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs