myRT

myRT report for GCA_002788675.1_ASM278867v1

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Seq: PFRS01000004.1 Candidatus Pacebacteria bacterium CG_4_9_14_0_2_um_filter_40_15 CG_4_9_14_0.2_um_filter_scaffold_178_c, whole genome shotgun sequence (49170 bp)
Overview 1 RT 1: 2909-5934 bp Neighborhood of RT #1 [2909, 6029] HipB RVT-Retrons DUF3800 Feature: gene Location: 2909-3073 bp Feature: gene Location: 3109-3432 bp Feature: domain Description: HipB Location: 3124-3397 bp Feature: domain Description: HipB Location: 31 24-3397 bp Feature: gene Location: 3419-4390 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3626-4202 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3626-4202 bp Feature: gene Location: 4434-4955 bp Feature: gene Location: 5289-6029 bp Feature: domain Description: DUF3800 Location: 5310-5934 bp Feature: domain Description: DUF3800 Location: 531 0-5934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipB (COG1396), RVT-Retrons, DUF3800 (pfam12686)

Seq: PFRS01000005.1 Candidatus Pacebacteria bacterium CG_4_9_14_0_2_um_filter_40_15 CG_4_9_14_0.2_um_filter_scaffold_4_c, whole genome shotgun sequence (382594 bp)
Overview 1 RT 1: 143571-147666 bp Neighborhood of RT #1 [143571, 147674] AbiEii COG5340 RVT-DGRs DDE_Tnp_IS1595 DDE_Tnp_IS1595 RVT-DGRs Avd_like Feature: gene Location: 143571-144353 bp Feature: domain Description: AbiEii Location: 143661-144243 bp Feature: domain Description: AbiEii Location: 143661-1442 43 bp Feature: gene Location: 144391-145005 bp Feature: domain Description: COG5340 Location: 144421-144838 bp Feature: domain Description: COG5340 Location: 14442 1-144838 bp Feature: gene Location: 145088-145840 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 145112-145649 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 145112 -145649 bp Feature: gene Location: 145857-146543 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 145908-146031 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 145908-146031 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 146064-146481 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 146064-146481 bp Feature: gene Location: 146547-146975 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 146742-146964 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 146742 -146964 bp Feature: gene Location: 147075-147221 bp Feature: gene Location: 147336-147674 bp Feature: domain Description: Avd_like Location: 147357-147666 bp Feature: domain Description: Avd_like Location: 147357-147666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), COG5340 (Transcriptional regulator, predicted component of viral defense system ), RVT-DGRs, DDE_Tnp_IS1595 (pfam12762), Avd_like (cd16376)