myRT

myRT report for GCA_002789735.1_ASM278973v1

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Seq: PFTU01000625.1 Armatimonadetes bacterium CG_4_9_14_3_um_filter_66_14 CG_4_9_14_3_um_filter_150_scaffold_12799_c, whole genome shotgun sequence (8091 bp)
Overview 1 RT 1: 4914-7845 bp Neighborhood of RT #1 [4914, 7889] DUF1080 DUF1080 RVT-DGRs RVT-DGRs Avd_like Feature: gene Location: 4914-5591 bp Feature: domain Description: DUF1080 Location: 5013-5577 bp Feature: domain Description: DUF1 080 Location: 501 3-5577 bp Feature: gene Location: 5705-6406 bp Feature: domain Description: DUF1080 Location: 5822-6389 bp Feature: domain Description: DUF1 080 Location: 5822-6389 bp Feature: gene Location: 6589-7365 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6799-6919 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6799-691 9 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7012-7114 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 701 2-71 1 4 bp Feature: gene Location: 7455-7889 bp Feature: domain Description: Avd_like Location: 7542-7845 bp Feature: domain Description: Avd_like Location: 7542-7845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1080 (pfam06439), RVT-DGRs, Avd_like (cd16376)

Seq: PFTU01000334.1 Armatimonadetes bacterium CG_4_9_14_3_um_filter_66_14 CG_4_9_14_3_um_filter_150_scaffold_18441_c, whole genome shotgun sequence (5642 bp)
Overview 1 RT 1: 1-4261 bp Neighborhood of RT #1 [1, 4275] RVT-DGRs ClpA ClpA Yop-YscD_cpl Feature: gene Location: 1-978 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 115-760 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 115-760 bp Feature: gene Location: 1584-3896 bp Feature: domain Description: ClpA Location: 1608-2832 bp Feature: domain Description: ClpA Location: 1608-2 832 bp Feature: domain Description: ClpA Location: 2871-3867 bp Feature: domain Description: ClpA Location: 2 871-3867 bp Feature: gene Location: 3967-4275 bp Feature: domain Description: Yop-YscD_cpl Location: 4000-4261 bp Feature: domain Description: Yop-YscD_cpl Location: 4000-42 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, ClpA (TIGR02639), Yop-YscD_cpl (pfam16697)

Seq: PFTU01000536.1 Armatimonadetes bacterium CG_4_9_14_3_um_filter_66_14 CG_4_9_14_3_um_filter_150_scaffold_19669_c, whole genome shotgun sequence (5402 bp)
Overview 1 RT 1: 3-5266 bp Neighborhood of RT #1 [3, 5301] COG2865 DUF4091 RVT-DGRs Hrd Feature: gene Location: 3-893 bp Feature: domain Description: COG2865 Location: 33-891 bp Feature: domain Description: COG2865 Location: 3 3 -891 bp Feature: gene Location: 1114-3630 bp Feature: domain Description: DUF4091 Location: 3166-3376 bp Feature: domain Description: DUF4091 Location: 3 166-3 3 76 bp Feature: gene Location: 4402-4761 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4405-4555 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4405-4555 bp Feature: gene Location: 4822-5301 bp Feature: domain Description: Hrd Location: 5059-5266 bp Feature: domain Description: Hrd Location: 5059-5266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2865 (Predicted transcriptional regulator, contains HTH domain ), DUF4091 (pfam13320), RVT-DGRs, Hrd (LOAD_Hrd)

Seq: PFTU01000359.1 Armatimonadetes bacterium CG_4_9_14_3_um_filter_66_14 CG_4_9_14_3_um_filter_150_scaffold_20186_c, whole genome shotgun sequence (5314 bp)
Overview 1 RT 1: 1601-4588 bp Neighborhood of RT #1 [1601, 5166] GrpE RVT-DGRs RVT-DGRs Feature: gene Location: 1601-2146 bp Feature: domain Description: GrpE Location: 1703-2132 bp Feature: domain Description: GrpE Location: 1703-2132 bp Feature: gene Location: 2289-3794 bp Feature: gene Location: 3616-5166 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3862-3982 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3862-3982 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4069-4588 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4 069-4 588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GrpE (pfam01025), RVT-DGRs

Seq: PFTU01000462.1 Armatimonadetes bacterium CG_4_9_14_3_um_filter_66_14 CG_4_9_14_3_um_filter_150_scaffold_23841_c, whole genome shotgun sequence (4720 bp)
Overview 1 RT 1: 2-4260 bp Neighborhood of RT #1 [2, 4718] RVT-DGRs ARS_like Feature: gene Location: 2-631 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5-437 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5 -437 bp Feature: gene Location: 678-3131 bp Feature: gene Location: 3168-4718 bp Feature: domain Description: ARS_like Location: 3195-4260 bp Feature: domain Description: ARS_like Location: 3195 -4260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, ARS_like (cd16146)

Seq: PFTU01000738.1 Armatimonadetes bacterium CG_4_9_14_3_um_filter_66_14 CG_4_9_14_3_um_filter_150_scaffold_33656_c, whole genome shotgun sequence (3776 bp)
Overview 1 RT 1: 3-1690 bp Neighborhood of RT #1 [3, 1719] RVT-DGRs YiaG Feature: gene Location: 3-563 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12-360 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12-36 0 bp Feature: gene Location: 1059-1433 bp Feature: gene Location: 1396-1719 bp Feature: domain Description: YiaG Location: 1507-1690 bp Feature: domain Description: YiaG Location: 1507-16 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, YiaG (COG2944)

Seq: PFTU01000235.1 Armatimonadetes bacterium CG_4_9_14_3_um_filter_66_14 CG_4_9_14_3_um_filter_150_scaffold_39869_c, whole genome shotgun sequence (3271 bp)
Overview 1 RT 1: 1-2668 bp Neighborhood of RT #1 [1, 2706] RVT-UNC COG4951 COG4951 Cas1_I-II-III Feature: gene Location: 1-528 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 13-130 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 13-130 bp Feature: domain Description: COG4951 Location: 388-523 bp Feature: domain Description: COG4951 Location: 388-523 bp Feature: gene Location: 580-1653 bp Feature: domain Description: COG4951 Location: 586-934 bp Feature: domain Description: COG4951 Location: 586-934 bp Feature: gene Location: 1828-2706 bp Feature: domain Description: Cas1_I-II-III Location: 1834-2668 bp Feature: domain Description: Cas1_I-II-III Location: 1834-2668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs/RVT-GII/RVT-CRISPR(RVT-UNC), COG4951 (Uncharacterized protein ), Cas1_I-II-III (cl00656)

Seq: PFTU01000753.1 Armatimonadetes bacterium CG_4_9_14_3_um_filter_66_14 CG_4_9_14_3_um_filter_150_scaffold_43604_c, whole genome shotgun sequence (2942 bp)
Overview 1 RT 1: 1-2842 bp Neighborhood of RT #1 [1, 2886] YfmG RVT-DGRs HRDC Feature: gene Location: 1-888 bp Feature: domain Description: YfmG Location: 130-853 bp Feature: domain Description: YfmG Location: 130-8 53 bp Feature: gene Location: 885-2273 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 939-1695 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 939-1695 bp Feature: gene Location: 2404-2886 bp Feature: domain Description: HRDC Location: 2653-2842 bp Feature: domain Description: HRDC Location: 2653-28 42 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, HRDC (smart00341)

Seq: PFTU01000350.1 Armatimonadetes bacterium CG_4_9_14_3_um_filter_66_14 CG_4_9_14_3_um_filter_150_scaffold_7498_c, whole genome shotgun sequence (13977 bp)
Overview 1 RT 1: 2-4722 bp Neighborhood of RT #1 [2, 4763] Avd_like RVT-DGRs RVT-DGRs NT_KNTase_like DUF4058 Feature: gene Location: 2-178 bp Feature: gene Location: 375-794 bp Feature: domain Description: Avd_like Location: 408-714 bp Feature: domain Description: Avd_like Location: 408-714 bp Feature: gene Location: 1459-2655 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1684-1807 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1684-1807 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1906-2422 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19 06-2422 bp Feature: gene Location: 3170-3682 bp Feature: domain Description: NT_KNTase_like Location: 3221-3371 bp Feature: domain Description: NT_KNTase_like Location: 3221-3371 bp Feature: gene Location: 3966-4763 bp Feature: domain Description: DUF4058 Location: 3969-4722 bp Feature: domain Description: DUF4058 Location: 39 69 -4722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, NT_KNTase_like (cd05403), DUF4058 (pfam13267)