myRT

myRT report for GCA_002791775.1_ASM279177v1

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Seq: PFNB01000361.1 Armatimonadetes bacterium CG_4_10_14_0_8_um_filter_66_14 CG_4_10_14_0.8_um_filter_scaffold_14332_c, whole genome shotgun sequence (4653 bp)
Overview 1 RT 1: 3-4456 bp Neighborhood of RT #1 [3, 4650] ARS_like RVT-DGRs Feature: gene Location: 3-1490 bp Feature: domain Description: ARS_like Location: 9-1032 bp Feature: domain Description: ARS_like Location: 9-1 032 bp Feature: gene Location: 1527-3980 bp Feature: gene Location: 4027-4650 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4030-4456 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4030-4456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ARS_like (cd16146), RVT-DGRs

Seq: PFNB01000096.1 Armatimonadetes bacterium CG_4_10_14_0_8_um_filter_66_14 CG_4_10_14_0.8_um_filter_scaffold_19552_c, whole genome shotgun sequence (4055 bp)
Overview 1 RT 1: 311-4031 bp Neighborhood of RT #1 [311, 4054] DUF1080 DUF1080 RVT-DGRs RVT-DGRs Avd_like pfam03781 Feature: gene Location: 311-988 bp Feature: domain Description: DUF1080 Location: 410-974 bp Feature: domain Description: DUF1080 Location: 410-974 bp Feature: gene Location: 1102-1803 bp Feature: domain Description: DUF1080 Location: 1219-1786 bp Feature: domain Description: DUF1080 Location: 12 19-1786 bp Feature: gene Location: 1986-2762 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2196-2316 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 196-2 316 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2409-2511 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 409-2 511 bp Feature: gene Location: 2852-3286 bp Feature: domain Description: Avd_like Location: 2939-3242 bp Feature: domain Description: Avd_like Location: 2 939-32 42 bp Feature: gene Location: 3389-4054 bp Feature: domain Description: pfam03781 Location: 3392-4031 bp Feature: domain Description: pfam03781 Location: 3392 -4031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1080 (pfam06439), RVT-DGRs, Avd_like (cd16376), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)

Seq: PFNB01000707.1 Armatimonadetes bacterium CG_4_10_14_0_8_um_filter_66_14 CG_4_10_14_0.8_um_filter_scaffold_19955_c, whole genome shotgun sequence (6647 bp)
Overview 1 RT 1: 2060-6435 bp Neighborhood of RT #1 [2060, 6455] YiaG RVT-DGRs Avd_like YfmG Feature: gene Location: 2060-2383 bp Feature: domain Description: YiaG Location: 2171-2354 bp Feature: domain Description: YiaG Location: 2171-23 54 bp Feature: gene Location: 2346-2720 bp Feature: gene Location: 3216-4283 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3423-4080 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 423 -4080 bp Feature: gene Location: 4760-5053 bp Feature: domain Description: Avd_like Location: 4763-4967 bp Feature: domain Description: Avd_like Location: 4763 -4967 bp Feature: gene Location: 5256-6455 bp Feature: domain Description: YfmG Location: 5562-6435 bp Feature: domain Description: YfmG Location: 5562-643 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YiaG (COG2944), RVT-DGRs, Avd_like (cd16376), YfmG (COG1262)

Seq: PFNB01000381.1 Armatimonadetes bacterium CG_4_10_14_0_8_um_filter_66_14 CG_4_10_14_0.8_um_filter_scaffold_20538_c, whole genome shotgun sequence (3704 bp)
Overview 1 RT 1: 2-2990 bp Neighborhood of RT #1 [2, 3028] RVT-CRISPR COG4951 COG4951 Cas1_I-II-III Feature: gene Location: 2-850 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 173-443 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 173-4 4 3 bp Feature: domain Description: COG4951 Location: 710-845 bp Feature: domain Description: COG4 951 Location: 710-84 5 bp Feature: gene Location: 902-1975 bp Feature: domain Description: COG4951 Location: 908-1256 bp Feature: domain Description: COG4 951 Location: 908-1256 bp Feature: gene Location: 2150-3028 bp Feature: domain Description: Cas1_I-II-III Location: 2156-2990 bp Feature: domain Description: Cas1_I-II-III Location: 2156-2990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, COG4951 (Uncharacterized protein ), Cas1_I-II-III (cl00656)

Seq: PFNB01000630.1 Armatimonadetes bacterium CG_4_10_14_0_8_um_filter_66_14 CG_4_10_14_0.8_um_filter_scaffold_32021_c, whole genome shotgun sequence (3507 bp)
Overview 1 RT 1: 1277-3290 bp Neighborhood of RT #1 [1277, 3505] RVT-DGRs Feature: gene Location: 1277-2515 bp Feature: gene Location: 2584-2901 bp Feature: gene Location: 2921-3505 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2927-3290 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2927-3290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: PFNB01000338.1 Armatimonadetes bacterium CG_4_10_14_0_8_um_filter_66_14 CG_4_10_14_0.8_um_filter_scaffold_5540_c, whole genome shotgun sequence (8536 bp)
Overview 1 RT 1: 1764-7595 bp Neighborhood of RT #1 [1764, 7669] nirV Hrd RVT-DGRs DUF4091 COG2865 Feature: gene Location: 1764-1928 bp Feature: domain Description: nirV Location: 1782-1908 bp Feature: domain Description: nirV Location: 1782-1908 bp Feature: gene Location: 2095-2574 bp Feature: domain Description: Hrd Location: 2332-2539 bp Feature: domain Description: Hrd Location: 2332-2539 bp Feature: gene Location: 2635-2994 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2638-2788 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 26 38-2788 bp Feature: gene Location: 3793-6282 bp Feature: domain Description: DUF4091 Location: 5818-6028 bp Feature: domain Description: DUF4091 Location: 5818-6 028 bp Feature: gene Location: 6503-7669 bp Feature: domain Description: COG2865 Location: 6533-7595 bp Feature: domain Description: COG286 5 Location: 6 533-7595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nirV (LOAD_nirV), Hrd (LOAD_Hrd), RVT-DGRs, DUF4091 (pfam13320), COG2865 (Predicted transcriptional regulator, contains HTH domain )