myRT

myRT report for GCA_002791875.1_ASM279187v1

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Seq: PFNG01000195.1 Actinobacteria bacterium CG_4_10_14_0_8_um_filter_50_43 CG_4_10_14_0.8_um_filter_scaffold_10660_c, whole genome shotgun sequence (6510 bp)
Overview 1 RT 1: 919-6053 bp Neighborhood of RT #1 [919, 6109] CRISPR_Cas6 Cas1_I-II-III RVT-CRISPR cas4 cas1_CYANO CRISPR_Cas2 Feature: gene Location: 919-1872 bp Feature: domain Description: CRISPR_Cas6 Location: 1495-1861 bp Feature: domain Description: CRISPR_Cas6 Location: 1 495-1 861 bp Feature: gene Location: 1894-2901 bp Feature: domain Description: Cas1_I-II-III Location: 1906-2863 bp Feature: domain Description: Cas1 _I-II-III Location: 1 906-2863 bp Feature: gene Location: 3078-4778 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3309-3912 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3309-391 2 bp Feature: domain Description: cas4 Location: 4182-4716 bp Feature: domain Description: cas4 Location: 41 82-471 6 bp Feature: gene Location: 4839-5831 bp Feature: domain Description: cas1_CYANO Location: 4848-5826 bp Feature: domain Description: cas1 _CYANO Location: 4848-5826 bp Feature: gene Location: 5837-6109 bp Feature: domain Description: CRISPR_Cas2 Location: 5840-6053 bp Feature: domain Description: CRISPR_Cas2 Location: 5840-6053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas6 (pfam10040), Cas1_I-II-III (cl00656), RVT-CRISPR, cas4 (TIGR00372), cas1_CYANO (TIGR04093), CRISPR_Cas2 (pfam09827)

Seq: PFNG01000178.1 Actinobacteria bacterium CG_4_10_14_0_8_um_filter_50_43 CG_4_10_14_0.8_um_filter_scaffold_20724_c, whole genome shotgun sequence (5747 bp)
Overview 1 RT 1: 3074-5690 bp Neighborhood of RT #1 [3074, 5690] RVT-GII GIIM Feature: gene Location: 3074-3397 bp Feature: gene Location: 3539-3718 bp Feature: gene Location: 3824-5164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4106-4721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4106-472 1 bp Feature: domain Description: GIIM Note: maturase Location: 4775-4991 bp Feature: domain Description: GIIM Note: maturase Location: 4775-4991 bp Feature: gene Location: 5541-5690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)