myRT

myRT report for GCA_002792845.1_ASM279284v1

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Seq: PFPB01000031.1 Candidatus Nealsonbacteria bacterium CG_4_10_14_0_2_um_filter_38_17 CG_4_10_14_0.2_scaffold_1050_c, whole genome shotgun sequence (20285 bp)
Overview 1 RT 1: 6628-13386 bp Neighborhood of RT #1 [6628, 13386] PG_binding_1 PG_binding_1 LVIVD LVIVD LVIVD RVT-Retrons PIN_NicB-like Feature: gene Location: 6628-8559 bp Feature: domain Description: PG_binding_1 Location: 6634-6739 bp Feature: domain Description: PG_binding_1 Location: 6634-6739 bp Feature: domain Description: PG_binding_1 Location: 6991-7066 bp Feature: domain Description: PG_binding_1 Location: 6991 -7066 bp Feature: gene Location: 8693-9814 bp Feature: domain Description: LVIVD Location: 8981-9182 bp Feature: domain Description: LVIVD Location: 8981 -91 82 bp Feature: domain Description: LVIVD Location: 9218-9320 bp Feature: domain Description: LVIVD Location: 921 8-9320 bp Feature: domain Description: LVIVD Location: 9347-9698 bp Feature: domain Description: LVIVD Location: 9347-9698 bp Feature: gene Location: 10586-11596 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10712-11279 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 071 2-1 1 279 bp Feature: gene Location: 11991-12581 bp Feature: domain Description: PIN_NicB-like Location: 11997-12471 bp Feature: domain Description: PIN_NicB-like Location: 1 1 997-1 2471 bp Feature: gene Location: 12730-13386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PIN_NicB-like (cd18722), PG_binding_1 (pfam01471), LVIVD (sd00042)

Seq: PFPB01000030.1 Candidatus Nealsonbacteria bacterium CG_4_10_14_0_2_um_filter_38_17 CG_4_10_14_0.2_scaffold_1391_c, whole genome shotgun sequence (30895 bp)
Overview 1 RT 1: 16855-22059 bp Neighborhood of RT #1 [16855, 22079] Avd_like RVT-DGRs PRK00174 PRK00174 Feature: gene Location: 16855-17658 bp Feature: gene Location: 17998-18348 bp Feature: domain Description: Avd_like Location: 18007-18316 bp Feature: domain Description: Avd_like Location: 18007-18316 bp Feature: gene Location: 18387-19406 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 18597-19203 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 18597-192 03 bp Feature: gene Location: 19414-19635 bp Feature: gene Location: 19704-22079 bp Feature: domain Description: PRK00174 Location: 19872-20160 bp Feature: domain Description: PRK00174 Location: 19872 -2 0160 bp Feature: domain Description: PRK00174 Location: 20328-22059 bp Feature: domain Description: PRK00174 Location: 2 032 8-2 2 059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, PRK00174 (acetyl-CoA synthetase; Provisional)

Seq: PFPB01000062.1 Candidatus Nealsonbacteria bacterium CG_4_10_14_0_2_um_filter_38_17 CG_4_10_14_0.2_scaffold_1776_c, whole genome shotgun sequence (17609 bp)
Overview 1 RT 1: 959-7407 bp Neighborhood of RT #1 [959, 7415] cysS RVT-Retrons RVT-Retrons GtrA DnaX Feature: gene Location: 959-2356 bp Feature: domain Description: cysS Location: 965-2333 bp Feature: domain Description: cysS Location: 965-23 3 3 bp Feature: gene Location: 2432-2680 bp Feature: gene Location: 2848-4029 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3088-3331 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 088-3 3 3 1 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3430-3733 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 43 0-3 73 3 bp Feature: gene Location: 4343-4954 bp Feature: domain Description: GtrA Location: 4547-4949 bp Feature: domain Description: GtrA Location: 4547-4949 bp Feature: gene Location: 5076-7415 bp Feature: domain Description: DnaX Location: 5079-7407 bp Feature: domain Description: DnaX Location: 5079-7407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, GtrA (pfam04138), DnaX (COG2812), cysS (TIGR00435)