myRT

myRT report for GCA_002795745.1_ASM279574v1

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Seq: PHGY01000014.1 Salmonella enterica subsp. enterica serovar Enteritidis strain N152 N152_trimmed_contig_14, whole genome shotgun sequence (198223 bp)
Overview 1 RT 1: 27487-33801 bp Neighborhood of RT #1 [27487, 33803] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 27487-29187 bp Feature: domain Description: 5 Location: 28711-29005 bp Feature: domain Description: 5 Location: 2871 1 -29005 bp Feature: gene Location: 29317-29484 bp Feature: gene Location: 30103-30867 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 30226-30679 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 30226-30679 bp Feature: gene Location: 31191-31697 bp Feature: domain Description: PRK10201 Location: 31194-31692 bp Feature: domain Description: PRK1 0201 Location: 31 1 94-31 692 bp Feature: gene Location: 31821-33803 bp Feature: domain Description: PRK05658 Location: 31959-33801 bp Feature: domain Description: PRK05658 Location: 31 959-33801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: PHGY01000239.1 Salmonella enterica subsp. enterica serovar Enteritidis strain N152 N152_trimmed_contig_242, whole genome shotgun sequence (605 bp)
Overview 1 RT 1: 1-472 bp Neighborhood of RT #1 [1, 603] RVT-GII GIIM Feature: gene Location: 1-603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13-190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13-190 bp Feature: domain Description: GIIM Note: maturase Location: 253-472 bp Feature: domain Description: GIIM Note: maturase Location: 2 53-472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PHGY01000429.1 Salmonella enterica subsp. enterica serovar Enteritidis strain N152 N152_trimmed_contig_434, whole genome shotgun sequence (352 bp)
Overview 1 RT 1: 3-351 bp Neighborhood of RT #1 [3, 350] RVT-GII Feature: gene Location: 3-350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-3 51 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII