myRT

myRT report for GCA_002795755.1_ASM279575v1

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Seq: PHFH01000084.1 Klebsiella pneumoniae strain LKP817909 NODE_133_length_8514_cov_18.085506, whole genome shotgun sequence (8562 bp)
Overview 1 RT 1: 1576-4824 bp Neighborhood of RT #1 [1576, 4838] RVT-GII PRK10276 Feature: gene Location: 1576-1797 bp Feature: gene Location: 2059-2289 bp Feature: gene Location: 2523-4010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2928-3618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2928-361 8 bp Feature: gene Location: 4016-4183 bp Feature: gene Location: 4413-4838 bp Feature: domain Description: PRK10276 Location: 4416-4824 bp Feature: domain Description: PRK1 0276 Location: 441 6-4824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: PHFH01000216.1 Klebsiella pneumoniae strain LKP817909 NODE_405_length_45149_cov_14.036546, whole genome shotgun sequence (45197 bp)
Overview 1 RT 1: 603-7456 bp Neighborhood of RT #1 [603, 7473] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 603-1268 bp Feature: domain Description: INT_P4_C Location: 708-1266 bp Feature: domain Description: INT_P4_C Location: 708-12 66 bp Feature: gene Location: 1529-1969 bp Feature: domain Description: Integrase_1 Location: 1535-1751 bp Feature: domain Description: Integrase_1 Location: 1535-1751 bp Feature: gene Location: 2026-4104 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2434-2878 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 434-2 878 bp Feature: gene Location: 4104-6713 bp Feature: domain Description: FimD Location: 4161-6702 bp Feature: domain Description: FimD Location: 4161-6702 bp Feature: gene Location: 6745-7473 bp Feature: domain Description: FimC Location: 6778-7456 bp Feature: domain Description: FimC Location: 6778-7456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)