myRT

myRT report for GCA_002796795.1_ASM279679v1

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Seq: PHJF01000002.1 Epibacterium ulvae strain U95 Ga0207336_102, whole genome shotgun sequence (623661 bp)
Overview 1 RT 1: 190345-194805 bp Neighborhood of RT #1 [190345, 194852] Trypsin_2 RVT-Retrons PRK06427 thiamin_ThiO Feature: gene Location: 190345-190608 bp Feature: gene Location: 190755-191222 bp Feature: domain Description: Trypsin_2 Location: 190920-191190 bp Feature: domain Description: Trypsin_2 Location: 1 90920-1 91 1 90 bp Feature: gene Location: 191232-192167 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 191388-191979 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 91 388-1 91 979 bp Feature: gene Location: 193048-193866 bp Feature: domain Description: PRK06427 Location: 193072-193861 bp Feature: domain Description: PRK06427 Location: 1 93072-1 93861 bp Feature: gene Location: 193863-194852 bp Feature: domain Description: thiamin_ThiO Location: 193926-194805 bp Feature: domain Description: thiamin_ThiO Location: 1 93926-1 94805 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trypsin_2 (pfam13365), RVT-Retrons, PRK06427 (bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed), thiamin_ThiO (TIGR02352)

Seq: PHJF01000003.1 Epibacterium ulvae strain U95 Ga0207336_103, whole genome shotgun sequence (522230 bp)
Overview 1 RT 1: 30375-34820 bp Neighborhood of RT #1 [30375, 35431] PHA02517 Trypsin_2 RVT-Retrons Resolvase Recombinase Feature: gene Location: 30375-31232 bp Feature: domain Description: PHA02517 Location: 30465-31221 bp Feature: domain Description: PHA02 517 Location: 30465-312 2 1 bp Feature: gene Location: 31291-32172 bp Feature: domain Description: Trypsin_2 Location: 31648-32083 bp Feature: domain Description: Trypsin_2 Location: 31648-32 083 bp Feature: gene Location: 32256-32672 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32382-32640 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 382 -32 640 bp Feature: gene Location: 33407-33787 bp Feature: gene Location: 33875-35431 bp Feature: domain Description: Resolvase Location: 33923-34373 bp Feature: domain Description: Resolvase Location: 3392 3-34373 bp Feature: domain Description: Recombinase Location: 34511-34820 bp Feature: domain Description: Recombinase Location: 34511-3482 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), Trypsin_2 (pfam13365), RVT-Retrons, Resolvase (smart00857), Recombinase (pfam07508)

Seq: PHJF01000017.1 Epibacterium ulvae strain U95 Ga0207336_117, whole genome shotgun sequence (31444 bp)
Overview 1 RT 1: 27442-31442 bp Neighborhood of RT #1 [27442, 31442] TatD DUF3644 RVT-UNC Feature: gene Location: 27442-28125 bp Feature: domain Description: TatD Location: 27490-28117 bp Feature: domain Description: TatD Location: 27490-28117 bp Feature: gene Location: 28690-29862 bp Feature: domain Description: DUF3644 Location: 29041-29260 bp Feature: domain Description: DUF3 644 Location: 29041-29260 bp Feature: gene Location: 30241-31011 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 30427-30601 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3 0427-3 0601 bp Feature: gene Location: 31188-31442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TatD (COG0084), DUF3644 (pfam12358), RVT-CRISPR/RVT-UG28b/RVT-UG17/RVT-AbiP2(RVT-UNC)