myRT

myRT report for GCA_002796815.1_ASM279681v1

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Seq: PHJG01000080.1 Bacteroides vulgatus strain RJ2H1 RJ2H1_RJ2H1-contig-080.80, whole genome shotgun sequence (38876 bp)
Overview 1 RT 1: 4587-9421 bp Neighborhood of RT #1 [4587, 10137] PRK07983 PRK07983 RVT-GII IstB_IS21 HTH_23 COG4584 Feature: gene Location: 4587-5240 bp Feature: domain Description: PRK07983 Location: 4938-5022 bp Feature: domain Description: PRK07983 Location: 4938-5022 bp Feature: domain Description: PRK07983 Location: 5109-5199 bp Feature: domain Description: PRK07983 Location: 51 09-51 99 bp Feature: gene Location: 5258-5827 bp Feature: gene Location: 6131-7336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6317-6980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 631 7-6980 bp Feature: gene Location: 7772-8560 bp Feature: domain Description: IstB_IS21 Location: 7979-8504 bp Feature: domain Description: IstB_IS21 Location: 7979-8504 bp Feature: gene Location: 8572-10137 bp Feature: domain Description: HTH_23 Location: 8596-8719 bp Feature: domain Description: HTH_23 Location: 8596-871 9 bp Feature: domain Description: COG4584 Location: 8833-9421 bp Feature: domain Description: COG4584 Location: 8833-9421 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07983 (exodeoxyribonuclease X; Provisional), RVT-GII, IstB_IS21 (pfam01695), HTH_23 (pfam13384), COG4584 (Transposase )

Seq: PHJG01000089.1 Bacteroides vulgatus strain RJ2H1 RJ2H1_RJ2H1-contig-089.89, whole genome shotgun sequence (145901 bp)
Overview 1 RT 1: 23494-26874 bp Neighborhood of RT #1 [23494, 26874] RVT-DGRs Feature: gene Location: 23494-23988 bp Feature: gene Location: 24026-24256 bp Feature: gene Location: 24270-25037 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24603-24930 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 4603-2 4930 bp Feature: gene Location: 25322-25525 bp Feature: gene Location: 25555-26874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: PHJG01000099.1 Bacteroides vulgatus strain RJ2H1 RJ2H1_RJ2H1-contig-099.99, whole genome shotgun sequence (2477 bp)
Overview 1 RT 1: 123-2390 bp Neighborhood of RT #1 [123, 2390] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 123-1940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-1212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 90-1212 bp Feature: domain Description: Intron_maturas2 Location: 1356-1641 bp Feature: domain Description: Intron_maturas2 Location: 13 56-1641 bp Feature: domain Description: HNHc Note: nucleases Location: 1767-1911 bp Feature: domain Description: HNHc Note: nucleases Location: 1767-1911 bp Feature: gene Location: 2145-2390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)