myRT

myRT report for GCA_002797325.1_ASM279732v1

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Seq: KZ454938.1 Bacillus sp. FJAT-45037 genomic scaffold Scaffold1, whole genome shotgun sequence (3246732 bp)
Overview 1 RT 1: 742300-746250 bp 2 RT 2: 2510144-2513915 bp Neighborhood of RT #1 [742300, 746255] SH3_2 SH3_2 Transposase_20 RVT-GII GIIM DEDD_Tnp_IS110 Neighborhood of RT #2 [2510144, 2513977] GIIM RVT-GII sigpep_I_arch Feature: gene Location: 742300-742680 bp Feature: domain Description: SH3_2 Location: 742330-742498 bp Feature: domain Description: SH3_2 Location: 742330-742498 bp Feature: domain Description: SH3_2 Location: 742585-742669 bp Feature: domain Description: SH3_2 Location: 742585-742669 bp Feature: gene Location: 743138-743893 bp Feature: domain Description: Transposase_20 Location: 743480-743726 bp Feature: domain Description: Transposase_20 Location: 743480-743726 bp Feature: gene Location: 744522-745445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 744747-745365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 744747-745365 bp Feature: gene Location: 745481-745813 bp Feature: domain Description: GIIM Note: maturase Location: 745487-745652 bp Feature: domain Description: GIIM Note: maturase Location: 745487-745652 bp Feature: gene Location: 745884-746255 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 745899-746250 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 745899-746250 bp Feature: gene Location: 2510144-2510623 bp Feature: gene Location: 2510818-2511150 bp Feature: domain Description: GIIM Note: maturase Location: 2510824-2510989 bp Feature: domain Description: GIIM Note: maturase Location: 251 0824-251 0989 bp Feature: gene Location: 2511186-2512109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2511411-2512029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 1 41 1 -251 2029 bp Feature: gene Location: 2512703-2513314 bp Feature: gene Location: 2513426-2513977 bp Feature: domain Description: sigpep_I_arch Location: 2513444-2513915 bp Feature: domain Description: sigpep_I_arch Location: 251 3444-251 391 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SH3_2 (pfam07653), Transposase_20 (pfam02371), RVT-GII, GIIM (pfam08388), DEDD_Tnp_IS110 (pfam01548), sigpep_I_arch (TIGR02228)

Seq: NISN01000004.1 Bacillus sp. FJAT-45037 Scaffold2_1, whole genome shotgun sequence (124516 bp)
Overview 1 RT 1: 23106-28103 bp 2 RT 2: 48288-53134 bp 3 RT 3: 60373-64341 bp Neighborhood of RT #1 [23106, 28103] RVT-GII HNHc RimL Neighborhood of RT #2 [48288, 53134] DadA RVT-GII RVT-GII HNHc HTH_XRE TPR_12 TPR_12 TPR_12 Neighborhood of RT #3 [60373, 65168] RVT-GII HTH_MerR-trunc Feature: gene Location: 23106-23573 bp Feature: gene Location: 23563-24147 bp Feature: gene Location: 25219-26988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25477-26170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5477-2 6170 bp Feature: domain Description: HNHc Note: nucleases Location: 26725-26866 bp Feature: domain Description: HNHc Note: nucleases Location: 2 672 5-2 6866 bp Feature: gene Location: 27162-27737 bp Feature: domain Description: RimL Location: 27300-27681 bp Feature: domain Description: RimL Location: 2 7300-2 7681 bp Feature: gene Location: 27768-28103 bp Feature: gene Location: 48288-48485 bp Feature: domain Description: DadA Location: 48414-48483 bp Feature: domain Description: DadA Location: 48414-48483 bp Feature: gene Location: 48599-48757 bp Feature: gene Location: 49654-50103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49912-50098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49912 -50098 bp Feature: gene Location: 50149-51423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50155-50605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50155-50605 bp Feature: domain Description: HNHc Note: nucleases Location: 51181-51313 bp Feature: domain Description: HNHc Note: nucleases Location: 51181-51313 bp Feature: gene Location: 51627-52907 bp Feature: domain Description: HTH_XRE Location: 51651-51807 bp Feature: domain Description: HTH_XRE Location: 51651-51807 bp Feature: domain Description: TPR_12 Location: 51882-52041 bp Feature: domain Description: TPR_12 Location: 51882 -52 041 bp Feature: domain Description: TPR_12 Location: 52095-52290 bp Feature: domain Description: TPR_12 Location: 52 095-52 2 90 bp Feature: domain Description: TPR_12 Location: 52443-52656 bp Feature: domain Description: TPR_12 Location: 52 443-52 656 bp Feature: gene Location: 52931-53134 bp Feature: gene Location: 60373-60558 bp Feature: gene Location: 60600-61034 bp Feature: gene Location: 61921-62940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62179-62872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 179-62 872 bp Feature: gene Location: 63813-64133 bp Feature: gene Location: 64185-65168 bp Feature: domain Description: HTH_MerR-trunc Location: 64188-64341 bp Feature: domain Description: HTH_MerR-trunc Location: 64188-64341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), RimL (COG1670), DadA (COG0665), HTH_XRE (smart00530), TPR_12 (pfam13424), HTH_MerR-trunc (cd04762)