myRT

myRT report for GCA_002797375.1_ASM279737v1

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Seq: KZ454941.1 Bacillus sp. FJAT-42315 genomic scaffold Scaffold1, whole genome shotgun sequence (3571554 bp)
Overview 1 RT 1: 1400743-1406389 bp 2 RT 2: 2419257-2426975 bp 3 RT 3: 3273653-3284637 bp Neighborhood of RT #1 [1400743, 1406394] recJ RVT-GII HNH recJ ssDNA-exonuc_C PRK02304 Neighborhood of RT #2 [2419257, 2427016] PRK00092 polC RVT-GII GIIM HNHc polC Neighborhood of RT #3 [3273653, 3284651] ligA pcrA RVT-GII HNHc pcrA pcrA RVT-GII HNHc pcrA PcrB Feature: gene Location: 1400743-1401033 bp Feature: domain Description: recJ Location: 1400827-1401016 bp Feature: domain Description: recJ Location: 1 400827-1 401 01 6 bp Feature: gene Location: 1401217-1401453 bp Feature: gene Location: 1401742-1403637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1402072-1402816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 402072-1 40281 6 bp Feature: domain Description: HNH Note: nucleases Location: 1403374-1403494 bp Feature: domain Description: HNH Note: nucleases Location: 1 403374-1 403494 bp Feature: gene Location: 1403756-1405888 bp Feature: domain Description: recJ Location: 1403807-1405214 bp Feature: domain Description: recJ Location: 1 403807-1 40521 4 bp Feature: domain Description: ssDNA-exonuc_C Location: 1405232-1405838 bp Feature: domain Description: ssDNA-exonuc_C Location: 1 405232-1 405838 bp Feature: gene Location: 1405879-1406394 bp Feature: domain Description: PRK02304 Location: 1405882-1406389 bp Feature: domain Description: PRK02304 Location: 1 405882-1 406389 bp Feature: gene Location: 2419257-2419727 bp Feature: domain Description: PRK00092 Location: 2419260-2419722 bp Feature: domain Description: PRK00092 Location: 241 9260-241 9722 bp Feature: gene Location: 2419890-2420381 bp Feature: domain Description: polC Location: 2419893-2420379 bp Feature: domain Description: polC Location: 241 9893-2420379 bp Feature: gene Location: 2420521-2422245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2420617-2421334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 242061 7-2421 334 bp Feature: domain Description: GIIM Note: maturase Location: 2421412-2421634 bp Feature: domain Description: GIIM Note: maturase Location: 2421 41 2-2421 634 bp Feature: domain Description: HNHc Note: nucleases Location: 2421982-2422150 bp Feature: domain Description: HNHc Note: nucleases Location: 2421 982-24221 50 bp Feature: gene Location: 2422540-2422776 bp Feature: gene Location: 2423165-2427016 bp Feature: domain Description: polC Location: 2423189-2426975 bp Feature: domain Description: polC Location: 24231 89-2426975 bp Feature: gene Location: 3273653-3275659 bp Feature: domain Description: ligA Location: 3273665-3275654 bp Feature: domain Description: ligA Location: 3273665-3275654 bp Feature: gene Location: 3275677-3276162 bp Feature: domain Description: pcrA Location: 3275749-3276154 bp Feature: domain Description: pcrA Location: 3275749-32761 54 bp Feature: gene Location: 3276188-3278083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3276602-3277352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3276602-3277352 bp Feature: domain Description: HNHc Note: nucleases Location: 3277892-3277976 bp Feature: domain Description: HNHc Note: nucleases Location: 3277892-3277976 bp Feature: gene Location: 3278581-3279825 bp Feature: domain Description: pcrA Location: 3278671-3279796 bp Feature: domain Description: pcrA Location: 3278671 -3279796 bp Feature: gene Location: 3280009-3280251 bp Feature: gene Location: 3280261-3280419 bp Feature: gene Location: 3280615-3280764 bp Feature: domain Description: pcrA Location: 3280648-3280750 bp Feature: domain Description: pcrA Location: 3280648-3280750 bp Feature: gene Location: 3280824-3282644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3281112-3281853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3281 1 1 2-3281 853 bp Feature: domain Description: HNHc Note: nucleases Location: 3282420-3282525 bp Feature: domain Description: HNHc Note: nucleases Location: 3282420-3282525 bp Feature: gene Location: 3283314-3283949 bp Feature: domain Description: pcrA Location: 3283359-3283923 bp Feature: domain Description: pcrA Location: 3283359-3283923 bp Feature: gene Location: 3283959-3284651 bp Feature: domain Description: PcrB Location: 3283965-3284637 bp Feature: domain Description: PcrB Location: 3283965-3284637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recJ (TIGR00644), RVT-GII, HNH (pfam01844), ssDNA-exonuc_C (pfam10141), PRK02304 (adenine phosphoribosyltransferase; Provisional), PRK00092 (ribosome maturation protein RimP; Reviewed), polC (TIGR00354), GIIM (pfam08388), HNHc (smart00507), ligA (PRK14351)
pcrA (TIGR01073), PcrB (pfam01884)