myRT

myRT report for GCA_002798875.1_ASM279887v1

Download annotations/find similar RTs

Seq: PHIZ01000024.1 Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN068034 CFSAN068034_contig_24, whole genome shotgun sequence (4052 bp)
Overview 1 RT 1: 55-1861 bp Neighborhood of RT #1 [55, 1861] RVT-Retrons CspC Feature: gene Location: 55-1194 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 199-754 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 99-754 bp Feature: gene Location: 1199-1402 bp Feature: domain Description: CspC Location: 1202-1397 bp Feature: domain Description: CspC Location: 1 202-1 397 bp Feature: gene Location: 1661-1861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CspC (COG1278), RVT-Retrons

Seq: PHIZ01000026.1 Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN068034 CFSAN068034_contig_26, whole genome shotgun sequence (81514 bp)
Overview 1 RT 1: 31838-36763 bp Neighborhood of RT #1 [31838, 36771] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 31838-32560 bp Feature: domain Description: INT_P4_C Location: 31958-32489 bp Feature: domain Description: INT_P4_C Location: 31958-32 489 bp Feature: gene Location: 32885-33847 bp Feature: gene Location: 33847-34782 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33958-34543 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33958-34543 bp Feature: gene Location: 35030-35239 bp Feature: gene Location: 35584-36771 bp Feature: domain Description: PRK10473 Location: 35587-36763 bp Feature: domain Description: PRK10473 Location: 35587-36763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)