myRT

myRT report for GCA_002801795.1_ASM280179v1

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Seq: NREJ01000014.1 Mycobacteroides abscessus subsp. massiliense strain A174 A174_14, whole genome shotgun sequence (44115 bp)
Overview 1 RT 1: 27516-29761 bp Neighborhood of RT #1 [27516, 29772] Holin_SPP1 Holin_BhlA RVT-DGRs Avd_like Feature: gene Location: 27516-27749 bp Feature: domain Description: Holin_SPP1 Location: 27519-27732 bp Feature: domain Description: Holin_SPP1 Location: 2751 9-27732 bp Feature: gene Location: 27784-28002 bp Feature: domain Description: Holin_BhlA Location: 27787-27979 bp Feature: domain Description: Holin_BhlA Location: 27787-27979 bp Feature: gene Location: 28027-29100 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 28237-28891 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 28237-28891 bp Feature: gene Location: 29177-29401 bp Feature: gene Location: 29428-29772 bp Feature: domain Description: Avd_like Location: 29455-29761 bp Feature: domain Description: Avd_like Location: 29455-29761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Holin_SPP1 (pfam04688), Holin_BhlA (pfam10960), RVT-DGRs, Avd_like (cd16376)

Seq: NREJ01000017.1 Mycobacteroides abscessus subsp. massiliense strain A174 A174_17, whole genome shotgun sequence (8528 bp)
Overview 1 RT 1: 1988-7389 bp Neighborhood of RT #1 [1988, 7389] Avd_like RVT-DGRs Prophage_tail Feature: gene Location: 1988-2323 bp Feature: domain Description: Avd_like Location: 2006-2312 bp Feature: domain Description: Avd_like Location: 2 006-2 312 bp Feature: gene Location: 2338-2565 bp Feature: gene Location: 2601-3713 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2853-3507 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 853-3507 bp Feature: gene Location: 3720-7124 bp Feature: domain Description: Prophage_tail Location: 3840-4770 bp Feature: domain Description: Prophage_tail Location: 3840-4770 bp Feature: gene Location: 7144-7389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Prophage_tail (pfam06605)

Seq: NREJ01000034.1 Mycobacteroides abscessus subsp. massiliense strain A174 A174_34, whole genome shotgun sequence (4091 bp)
Overview 1 RT 1: 1-3902 bp Neighborhood of RT #1 [1, 4090] RVT-GII xerC xerC xerC RVT-GII Feature: gene Location: 1-396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124-358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124-3 58 bp Feature: gene Location: 450-1412 bp Feature: domain Description: xerC Location: 459-1332 bp Feature: domain Description: xerC Location: 459-13 3 2 bp Feature: gene Location: 1402-3324 bp Feature: domain Description: xerC Location: 1408-2296 bp Feature: domain Description: xerC Location: 1408-2296 bp Feature: domain Description: xerC Location: 2422-3268 bp Feature: domain Description: xerC Location: 2422-3 268 bp Feature: gene Location: 3386-4090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3413-3902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 413 -3 902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, xerC (PRK01287)