myRT

myRT report for GCA_002803295.2_ASM280329v2

Download annotations/find similar RTs

Seq: PGGB02000018.1 Caedibacter taeniospiralis strain 51K plasmid pKAP, whole genome shotgun sequence (41651 bp)
Overview 1 RT 1: 31048-34976 bp Neighborhood of RT #1 [31048, 35092] RVT-GII DUF3799 RecT RecT Feature: gene Location: 31048-31332 bp Feature: gene Location: 31561-31722 bp Feature: gene Location: 32142-33476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32421-33108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32421 -331 08 bp Feature: gene Location: 33616-34476 bp Feature: domain Description: DUF3799 Location: 33766-34354 bp Feature: domain Description: DUF3799 Location: 33766-34354 bp Feature: gene Location: 34469-35092 bp Feature: domain Description: RecT Location: 34559-34748 bp Feature: domain Description: RecT Location: 34559-34748 bp Feature: domain Description: RecT Location: 34847-34976 bp Feature: domain Description: RecT Location: 34847-34976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF3799 (pfam12684), RecT (pfam03837)

Seq: PGGB02000001.1 Caedibacter taeniospiralis strain 51K CDBSP_s01, whole genome shotgun sequence (189643 bp)
Overview 1 RT 1: 187061-189632 bp Neighborhood of RT #1 [187061, 189640] BaeS RVT-GII GIIM Feature: gene Location: 187061-187384 bp Feature: domain Description: BaeS Location: 187073-187376 bp Feature: domain Description: BaeS Location: 187073-187376 bp Feature: gene Location: 187434-187979 bp Feature: gene Location: 188636-189640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188690-189332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188690-189332 bp Feature: domain Description: GIIM Note: maturase Location: 189410-189632 bp Feature: domain Description: GIIM Note: maturase Location: 189410-189632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), RVT-GII, GIIM (pfam08388)

Seq: PGGB02000005.1 Caedibacter taeniospiralis strain 51K CDBSP_s05, whole genome shotgun sequence (94844 bp)
Overview 1 RT 1: 91505-94837 bp Neighborhood of RT #1 [91505, 94842] PhnW-AepZ PucG RVT_N RVT-GII Feature: gene Location: 91505-92596 bp Feature: domain Description: PhnW-AepZ Location: 91526-92576 bp Feature: domain Description: PhnW-AepZ Location: 91526-92576 bp Feature: gene Location: 92586-93662 bp Feature: domain Description: PucG Location: 92607-93651 bp Feature: domain Description: PucG Location: 92607-93 651 bp Feature: gene Location: 94159-94842 bp Feature: RT Description: RVT_N Location: 94369-94609 bp Feature: RT Description: RVT_N Location: 943 69-94609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94657-94837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94657-9483 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhnW-AepZ (TIGR03301), PucG (COG0075), RVT_N (pfam13655), RVT-GII

Seq: PGGB02000007.1 Caedibacter taeniospiralis strain 51K CDBSP_s07, whole genome shotgun sequence (89413 bp)
Overview 1 RT 1: 35019-40468 bp Neighborhood of RT #1 [35019, 40548] PRK09709 RVT-GII LysR Feature: gene Location: 35019-37163 bp Feature: gene Location: 37171-37404 bp Feature: domain Description: PRK09709 Location: 37207-37396 bp Feature: domain Description: PRK09709 Location: 37207-37396 bp Feature: gene Location: 37544-38878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37823-38510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37823-38510 bp Feature: gene Location: 39287-39439 bp Feature: gene Location: 39565-40548 bp Feature: domain Description: LysR Location: 39631-40468 bp Feature: domain Description: LysR Location: 39631-4 04 68 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09709 (exodeoxyribonuclease VIII), RVT-GII, LysR (COG0583)

Seq: PGGB02000009.1 Caedibacter taeniospiralis strain 51K CDBSP_s09, whole genome shotgun sequence (74898 bp)
Overview 1 RT 1: 68282-72222 bp Neighborhood of RT #1 [68282, 72222] phage_P2_V RVT-GII GIIM Feature: gene Location: 68282-68812 bp Feature: gene Location: 68836-69507 bp Feature: domain Description: phage_P2_V Location: 68881-69496 bp Feature: domain Description: phage_P2_V Location: 68881-69496 bp Feature: gene Location: 69890-71149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70109-70763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70109-70763 bp Feature: domain Description: GIIM Note: maturase Location: 70847-71075 bp Feature: domain Description: GIIM Note: maturase Location: 70847-71075 bp Feature: gene Location: 71453-71743 bp Feature: gene Location: 72061-72222 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT phage_P2_V (TIGR01644), RVT-GII, GIIM (pfam08388)