myRT

myRT report for GCA_002804345.3_ASM280434v3

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Seq: CP024997.2 Escherichia coli strain S17-13 chromosome (5167254 bp)
Overview 1 RT 1: 3352830-3357675 bp 2 RT 2: 3382691-3386348 bp 3 RT 3: 4577684-4581566 bp Neighborhood of RT #1 [3352830, 3357675] DUF3987 Inovirus_Gp2 RVT-GII Neighborhood of RT #2 [3382691, 3386348] InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #3 [4577684, 4581571] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 3352830-3354263 bp Feature: domain Description: DUF3987 Location: 3352923-3354000 bp Feature: domain Description: DUF3987 Location: 3352923-3354000 bp Feature: gene Location: 3355121-3355684 bp Feature: domain Description: Inovirus_Gp2 Location: 3355178-3355619 bp Feature: domain Description: Inovirus_Gp2 Location: 33551 78-335561 9 bp Feature: gene Location: 3356010-3357173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3356124-3356811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33561 24-335681 1 bp Feature: gene Location: 3357160-3357468 bp Feature: gene Location: 3357502-3357675 bp Feature: gene Location: 3382691-3383017 bp Feature: domain Description: InsE Location: 3382694-3383015 bp Feature: domain Description: InsE Location: 3382694-338301 5 bp Feature: gene Location: 3383017-3383496 bp Feature: domain Description: PHA02517 Location: 3383077-3383431 bp Feature: domain Description: PHA0251 7 Location: 3383077-3383431 bp Feature: gene Location: 3384088-3385611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3384361-3385093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3384361 -3385093 bp Feature: domain Description: GIIM Note: maturase Location: 3385168-3385366 bp Feature: domain Description: GIIM Note: maturase Location: 33851 68-3385366 bp Feature: gene Location: 3385734-3386144 bp Feature: domain Description: PHA02517 Location: 3385737-3386139 bp Feature: domain Description: PHA0251 7 Location: 3385737-33861 39 bp Feature: gene Location: 3386178-3386348 bp Feature: gene Location: 4577684-4578142 bp Feature: domain Description: dut Location: 4577690-4578137 bp Feature: domain Description: dut Location: 4577690-45781 37 bp Feature: gene Location: 4578249-4578845 bp Feature: domain Description: slmA Location: 4578255-4578831 bp Feature: domain Description: slmA Location: 4578255-4578831 bp Feature: gene Location: 4578891-4579850 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4579026-4579575 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4579026-4579575 bp Feature: gene Location: 4580148-4580804 bp Feature: domain Description: pyrE Location: 4580166-4580799 bp Feature: domain Description: pyrE Location: 45801 66-4580799 bp Feature: gene Location: 4580855-4581571 bp Feature: domain Description: rph Location: 4580858-4581566 bp Feature: domain Description: rph Location: 4580858-4581 566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3987 (pfam13148), Inovirus_Gp2 (pfam11726), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336)
rph (PRK00173)