myRT

myRT report for GCA_002807095.1_ASM280709v1

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Seq: NJGD01000025.1 Sinorhizobium meliloti strain AC50a NODE_25_length_61690_cov_29.3922_ID_2460, whole genome shotgun sequence (61690 bp)
Overview 1 RT 1: 49237-52785 bp Neighborhood of RT #1 [49237, 52805] COG3415 RVT-GII GIIM DDE_3 AcpP Feature: gene Location: 49237-49623 bp Feature: domain Description: COG3415 Location: 49240-49600 bp Feature: domain Description: COG341 5 Location: 49240-49600 bp Feature: gene Location: 49902-50240 bp Feature: gene Location: 50237-51484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50453-51095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50453-51 095 bp Feature: domain Description: GIIM Note: maturase Location: 51176-51398 bp Feature: domain Description: GIIM Note: maturase Location: 51 1 76-51 398 bp Feature: gene Location: 51538-51933 bp Feature: domain Description: DDE_3 Location: 51571-51907 bp Feature: domain Description: DDE_3 Location: 51 571 -51 907 bp Feature: gene Location: 52524-52805 bp Feature: domain Description: AcpP Location: 52614-52785 bp Feature: domain Description: AcpP Location: 5261 4-52785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358), AcpP (COG0236)

Seq: NJGD01000037.1 Sinorhizobium meliloti strain AC50a NODE_37_length_20159_cov_33.9266_ID_3000, whole genome shotgun sequence (20159 bp)
Overview 1 RT 1: 11607-16651 bp Neighborhood of RT #1 [11607, 16689] CHD TolBN TPR TPR Transposase_mut RVT-GII GIIM IS285 Feature: gene Location: 11607-13370 bp Feature: domain Description: CHD Location: 11640-12123 bp Feature: domain Description: CHD Location: 11640-12 12 3 bp Feature: domain Description: TolBN Location: 12144-12576 bp Feature: domain Description: TolBN Location: 12 144-12 576 bp Feature: domain Description: TPR Location: 12810-13053 bp Feature: domain Description: TPR Location: 12 810-13053 bp Feature: domain Description: TPR Location: 13083-13356 bp Feature: domain Description: TPR Location: 13083-13356 bp Feature: gene Location: 13555-14223 bp Feature: domain Description: Transposase_mut Location: 13561-14137 bp Feature: domain Description: Transposase_mut Location: 13561-14137 bp Feature: gene Location: 14353-15870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14656-15418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14656-15418 bp Feature: domain Description: GIIM Note: maturase Location: 15487-15757 bp Feature: domain Description: GIIM Note: maturase Location: 15487-15757 bp Feature: gene Location: 16261-16392 bp Feature: gene Location: 16441-16689 bp Feature: domain Description: IS285 Location: 16447-16651 bp Feature: domain Description: IS2 85 Location: 16447-16651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), TolBN (COG5616), TPR (smart00028), Transposase_mut (pfam00872), RVT-GII, GIIM (pfam08388), IS285 (COG3328)