myRT

myRT report for GCA_002807155.1_ASM280715v1

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Seq: NMYJ01000224.1 Bacillus cereus strain SJ-S24 s_2_24_CLC_190_len:241, whole genome shotgun sequence (241 bp)
Overview 1 RT 1: 1-217 bp Neighborhood of RT #1 [1, 240] RVT-GII Feature: gene Location: 1-240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13-217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3-21 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NMYJ01000648.1 Bacillus cereus strain SJ-S24 s_2_24_CLC_361_len:630, whole genome shotgun sequence (630 bp)
Overview 1 RT 1: 3-477 bp Neighborhood of RT #1 [3, 629] RVT-GII Feature: gene Location: 3-629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NMYJ01000226.1 Bacillus cereus strain SJ-S24 s_2_24_CLC_519_len:289, whole genome shotgun sequence (289 bp)
Overview 1 RT 1: 1-286 bp Neighborhood of RT #1 [1, 288] RVT-GII Feature: gene Location: 1-288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NMYJ01000700.1 Bacillus cereus strain SJ-S24 s_2_24_raw_SPAdes_110_len:510, whole genome shotgun sequence (510 bp)
Overview 1 RT 1: 3-510 bp Neighborhood of RT #1 [3, 509] RVT-GII Feature: gene Location: 3-509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120-510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120-510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NMYJ01000206.1 Bacillus cereus strain SJ-S24 s_2_24_raw_SPAdes_13_len:152625, whole genome shotgun sequence (152625 bp)
Overview 1 RT 1: 55651-63038 bp 2 RT 2: 86774-90519 bp 3 RT 3: 104962-111394 bp 4 RT 4: 118980-127565 bp 5 RT 5: 143441-149144 bp Neighborhood of RT #1 [55651, 63052] RVT_N RVT-GII GIIM nuc_hydro DEXXQc_Upf1-like KOG1803 Neighborhood of RT #2 [86774, 90536] RVT-GII HNHc E1_enzyme_family Neighborhood of RT #3 [104962, 111394] DUF3854 RVT-GII GIIM HNHc Neighborhood of RT #4 [118980, 127663] Replic_Relax RVT-GII Intron_maturas2 HNHc TraG-D_C xerC Neighborhood of RT #5 [143441, 149144] TraC-F-type AAA_10 RVT-GII HNHc AAA_10 Feature: gene Location: 55651-55878 bp Feature: gene Location: 56044-56286 bp Feature: gene Location: 56487-58133 bp Feature: RT Description: RVT_N Location: 56529-56766 bp Feature: RT Description: RVT_N Location: 5 65 29-5 6766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56820-57480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 6820-5 7480 bp Feature: domain Description: GIIM Note: maturase Location: 57549-57780 bp Feature: domain Description: GIIM Note: maturase Location: 5 75 49-5 7780 bp Feature: gene Location: 58853-59824 bp Feature: domain Description: nuc_hydro Location: 58889-59795 bp Feature: domain Description: nuc_hydro Location: 5 8889-5 9795 bp Feature: gene Location: 60236-63052 bp Feature: domain Description: DEXXQc_Upf1-like Location: 61295-62504 bp Feature: domain Description: DEXXQc_Upf1-like Location: 61295 -625 04 bp Feature: domain Description: KOG1803 Location: 62720-63038 bp Feature: domain Description: KOG1803 Location: 62720-63038 bp Feature: gene Location: 86774-86902 bp Feature: gene Location: 86964-87491 bp Feature: gene Location: 87555-89435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87885-88614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87885 -88614 bp Feature: domain Description: HNHc Note: nucleases Location: 89172-89322 bp Feature: domain Description: HNHc Note: nucleases Location: 89172-89322 bp Feature: gene Location: 89707-89841 bp Feature: gene Location: 90135-90536 bp Feature: domain Description: E1_enzyme_family Location: 90183-90519 bp Feature: domain Description: E1_enzyme_family Location: 90183-905 19 bp Feature: gene Location: 104962-105192 bp Feature: gene Location: 105685-106956 bp Feature: domain Description: DUF3854 Location: 106603-106924 bp Feature: domain Description: DUF385 4 Location: 106603-106924 bp Feature: gene Location: 106961-108856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107327-108026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107327-108026 bp Feature: domain Description: GIIM Note: maturase Location: 108110-108353 bp Feature: domain Description: GIIM Note: maturase Location: 108110-10835 3 bp Feature: domain Description: HNHc Note: nucleases Location: 108599-108737 bp Feature: domain Description: HNHc Note: nucleases Location: 1085 99-108737 bp Feature: gene Location: 109525-109668 bp Feature: gene Location: 109844-111394 bp Feature: gene Location: 118980-120530 bp Feature: domain Description: Replic_Relax Location: 119076-119799 bp Feature: domain Description: Replic_Relax Location: 119076-119799 bp Feature: gene Location: 120502-122190 bp Feature: gene Location: 122804-124621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123068-123899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123068-123899 bp Feature: domain Description: Intron_maturas2 Location: 123977-124271 bp Feature: domain Description: Intron_maturas2 Location: 123977-124271 bp Feature: domain Description: HNHc Note: nucleases Location: 124418-124595 bp Feature: domain Description: HNHc Note: nucleases Location: 124418-1245 95 bp Feature: gene Location: 124725-126122 bp Feature: domain Description: TraG-D_C Location: 124869-125232 bp Feature: domain Description: TraG-D_C Location: 124869-125 232 bp Feature: gene Location: 126689-127663 bp Feature: domain Description: xerC Location: 126716-127565 bp Feature: domain Description: xerC Location: 126716-1275 65 bp Feature: gene Location: 143441-144976 bp Feature: domain Description: TraC-F-type Location: 144131-144629 bp Feature: domain Description: TraC-F-type Location: 144131-144629 bp Feature: domain Description: AAA_10 Location: 144782-144959 bp Feature: domain Description: AAA_10 Location: 144782-14495 9 bp Feature: gene Location: 145123-145299 bp Feature: gene Location: 145692-147524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145992-146697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145 992-146697 bp Feature: domain Description: HNHc Note: nucleases Location: 147276-147408 bp Feature: domain Description: HNHc Note: nucleases Location: 147276-147408 bp Feature: gene Location: 147782-148660 bp Feature: domain Description: AAA_10 Location: 147788-148544 bp Feature: domain Description: AAA_10 Location: 147788-1485 44 bp Feature: gene Location: 148662-149144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), nuc_hydro (cl00226), DEXXQc_Upf1-like (cd17934), KOG1803 (KOG1803, DNA helicase ), HNHc (smart00507), E1_enzyme_family (cl22428), DUF3854 (pfam12965), Replic_Relax (pfam13814)
Intron_maturas2 (pfam01348), TraG-D_C (pfam12696), xerC (PRK01287), TraC-F-type (TIGR02746), AAA_10 (pfam12846)

Seq: NMYJ01000092.1 Bacillus cereus strain SJ-S24 s_2_24_raw_SPAdes_341_len_T:279, whole genome shotgun sequence (279 bp)
Overview 1 RT 1: 1-196 bp Neighborhood of RT #1 [1, 276] RVT-GII Feature: gene Location: 1-276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NMYJ01000187.1 Bacillus cereus strain SJ-S24 s_2_24_trimmed_SPAdes_227_len:308, whole genome shotgun sequence (308 bp)
Overview 1 RT 1: 3-306 bp Neighborhood of RT #1 [3, 305] RVT-GII Feature: gene Location: 3-305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII