myRT

myRT report for GCA_002807245.1_ASM280724v1

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Seq: NMZP01000624.1 Bacillus cereus strain SJ-S18 s_1_18_CLC_2720_len:117617, whole genome shotgun sequence (117617 bp)
Overview 1 RT 1: 33215-37904 bp Neighborhood of RT #1 [33215, 37904] Excalibur PRK09418 RVT_N RVT-GII GIIM RimL Feature: gene Location: 33215-33802 bp Feature: domain Description: Excalibur Location: 33311-33428 bp Feature: domain Description: Excalibur Location: 3331 1 -33428 bp Feature: domain Description: PRK09418 Location: 33449-33797 bp Feature: domain Description: PRK0941 8 Location: 33449-33797 bp Feature: gene Location: 34131-34388 bp Feature: gene Location: 34485-36131 bp Feature: RT Description: RVT_N Location: 34527-34764 bp Feature: RT Description: RVT_N Location: 34527-34764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34818-35478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3481 8-35478 bp Feature: domain Description: GIIM Note: maturase Location: 35547-35778 bp Feature: domain Description: GIIM Note: maturase Location: 35547-35778 bp Feature: gene Location: 36770-37315 bp Feature: domain Description: RimL Location: 36788-37301 bp Feature: domain Description: RimL Location: 36788-37301 bp Feature: gene Location: 37770-37904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Excalibur (smart00894), PRK09418 (bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), RimL (COG1670)

Seq: NMZP01000568.1 Bacillus cereus strain SJ-S18 s_1_18_trimmed_SPAdes_1039_len:2682, whole genome shotgun sequence (2682 bp)
Overview 1 RT 1: 117-2391 bp Neighborhood of RT #1 [117, 2391] RVT-GII HNHc Feature: gene Location: 117-1949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-1122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-112 2 bp Feature: domain Description: HNHc Note: nucleases Location: 1701-1833 bp Feature: domain Description: HNHc Note: nucleases Location: 1701-1833 bp Feature: gene Location: 2233-2391 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NMZP01000066.1 Bacillus cereus strain SJ-S18 s_1_18_trimmed_nodup_SPAdes_2_len:83453, whole genome shotgun sequence (83453 bp)
Overview 1 RT 1: 5551-10360 bp 2 RT 2: 16558-21608 bp 3 RT 3: 32451-44066 bp Neighborhood of RT #1 [5551, 10365] COG4712 RVT-GII beta_clamp Neighborhood of RT #2 [16558, 22135] NT_KNTase_like RVT-GII HEPN PRK06850 Neighborhood of RT #3 [32451, 44066] RVT-GII HNHc MTS DEXDc RVT-GII HNHc HELICc Feature: gene Location: 5551-5907 bp Feature: domain Description: COG4712 Location: 5560-5902 bp Feature: domain Description: COG4712 Location: 5560-5902 bp Feature: gene Location: 6331-6471 bp Feature: gene Location: 6666-8567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6984-7686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6984-7686 bp Feature: gene Location: 8645-9172 bp Feature: gene Location: 9253-10365 bp Feature: domain Description: beta_clamp Location: 9256-10360 bp Feature: domain Description: beta_clamp Location: 9256-103 60 bp Feature: gene Location: 16558-16959 bp Feature: domain Description: NT_KNTase_like Location: 16633-16936 bp Feature: domain Description: NT_KNTase_like Location: 1663 3 -1693 6 bp Feature: gene Location: 17518-17721 bp Feature: gene Location: 17718-19649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18039-18774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1803 9-18774 bp Feature: gene Location: 19795-20238 bp Feature: domain Description: HEPN Location: 19849-20197 bp Feature: domain Description: HEPN Location: 19849-20197 bp Feature: gene Location: 20363-22135 bp Feature: domain Description: PRK06850 Location: 20378-21608 bp Feature: domain Description: PRK06850 Location: 203 78-21608 bp Feature: gene Location: 32451-32864 bp Feature: gene Location: 32880-33023 bp Feature: gene Location: 33905-35833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34226-34961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 4226-3 4961 bp Feature: domain Description: HNHc Note: nucleases Location: 35552-35717 bp Feature: domain Description: HNHc Note: nucleases Location: 3 5552-3 5717 bp Feature: gene Location: 35978-37099 bp Feature: domain Description: MTS Location: 36074-36437 bp Feature: domain Description: MTS Location: 3 6074-3 643 7 bp Feature: gene Location: 37115-37342 bp Feature: gene Location: 37414-39093 bp Feature: domain Description: DEXDc Location: 38194-39067 bp Feature: domain Description: DEXDc Location: 3 8194-3 9067 bp Feature: gene Location: 39294-39428 bp Feature: gene Location: 39794-41593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40097-40799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40097-40799 bp Feature: domain Description: HNHc Note: nucleases Location: 41324-41474 bp Feature: domain Description: HNHc Note: nucleases Location: 413 24-41474 bp Feature: gene Location: 41654-43336 bp Feature: domain Description: HELICc Location: 42320-42719 bp Feature: domain Description: HELICc Location: 423 20-42719 bp Feature: gene Location: 43353-44066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4712 (Uncharacterized protein ), RVT-GII, beta_clamp (cl29549), NT_KNTase_like (cd05403), HEPN (smart00748), PRK06850 (hypothetical protein; Provisional), HNHc (smart00507), MTS (pfam05175), DEXDc (smart00487), HELICc (smart00490)

Seq: NMZP01000176.1 Bacillus cereus strain SJ-S18 s_1_18_trimmed_nodup_SPAdes_624_len:4924, whole genome shotgun sequence (4924 bp)
Overview 1 RT 1: 95-4450 bp Neighborhood of RT #1 [95, 4464] Fur RVT-GII Acetyltransf_10 DUF2614 Feature: gene Location: 95-529 bp Feature: domain Description: Fur Location: 113-524 bp Feature: domain Description: Fur Location: 113-524 bp Feature: gene Location: 1361-1564 bp Feature: gene Location: 1561-3501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1882-2614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1882-2614 bp Feature: gene Location: 3558-4001 bp Feature: domain Description: Acetyltransf_10 Location: 3696-3963 bp Feature: domain Description: Acetyltransf_10 Location: 3696-3963 bp Feature: gene Location: 4108-4464 bp Feature: domain Description: DUF2614 Location: 4120-4450 bp Feature: domain Description: DUF2614 Location: 4 120-4 4 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Acetyltransf_10 (pfam13673), DUF2614 (pfam11023), Fur (COG0735)