myRT

myRT report for GCA_002807315.1_ASM280731v1

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Seq: NMYT01001326.1 Bacillus cereus strain SJ-S7 s_0_7_CLC_2691_len:896, whole genome shotgun sequence (846 bp)
Overview 1 RT 1: 3-204 bp Neighborhood of RT #1 [3, 845] RVT-GII Feature: gene Location: 3-845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18-204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8-204 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NMYT01002044.1 Bacillus cereus strain SJ-S7 s_0_7_CLC_3529_len:1072, whole genome shotgun sequence (1037 bp)
Overview 1 RT 1: 2-929 bp Neighborhood of RT #1 [2, 931] RVT-GII Feature: gene Location: 2-931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 323-929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 3-92 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NMYT01002244.1 Bacillus cereus strain SJ-S7 s_0_7_raw_SPAdes_1782_len_T:3407, whole genome shotgun sequence (3355 bp)
Overview 1 RT 1: 1-3353 bp Neighborhood of RT #1 [1, 3352] DEXDc RVT_N RVT-GII Feature: gene Location: 1-2052 bp Feature: domain Description: DEXDc Location: 244-1198 bp Feature: domain Description: DEXDc Location: 244-1198 bp Feature: gene Location: 2624-3352 bp Feature: RT Description: RVT_N Location: 2678-2924 bp Feature: RT Description: RVT_N Location: 2678-2924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2978-3353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2978-3 3 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXDc (smart00487), RVT_N (pfam13655), RVT-GII

Seq: NMYT01001067.1 Bacillus cereus strain SJ-S7 s_0_7_trimmed_nodup_SPAdes_1029_len_T:620, whole genome shotgun sequence (620 bp)
Overview 1 RT 1: 1-616 bp Neighborhood of RT #1 [1, 618] RVT-GII GIIM Feature: gene Location: 1-618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-337 bp Feature: domain Description: GIIM Note: maturase Location: 400-616 bp Feature: domain Description: GIIM Note: maturase Location: 4 00-616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NMYT01003670.1 Bacillus cereus strain SJ-S7 s_0_7_trimmed_nodup_SPAdes_1205_len:4145, whole genome shotgun sequence (4107 bp)
Overview 1 RT 1: 1-3974 bp Neighborhood of RT #1 [1, 4105] RVT-GII HNHc HNH Feature: gene Location: 1-735 bp Feature: gene Location: 855-2753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1179-1917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1179-1917 bp Feature: domain Description: HNHc Note: nucleases Location: 2496-2643 bp Feature: domain Description: HNHc Note: nucleases Location: 2496-2643 bp Feature: gene Location: 3605-4105 bp Feature: domain Description: HNH Note: nucleases Location: 3839-3974 bp Feature: domain Description: HNH Note: nucleases Location: 3839-3974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNH (pfam01844), RVT-GII, HNHc (smart00507)

Seq: NMYT01002532.1 Bacillus cereus strain SJ-S7 s_0_7_trimmed_nodup_SPAdes_1779_len:5720, whole genome shotgun sequence (5678 bp)
Overview 1 RT 1: 1-4585 bp Neighborhood of RT #1 [1, 4599] recJ ssDNA-exonuc_C RVT-GII HNHc recJ Feature: gene Location: 1-1752 bp Feature: domain Description: recJ Location: 91-1501 bp Feature: domain Description: recJ Location: 91-1501 bp Feature: domain Description: ssDNA-exonuc_C Location: 1519-1744 bp Feature: domain Description: ssDNA-exonuc_C Location: 1519-1744 bp Feature: gene Location: 1769-3595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2060-2765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206 0-276 5 bp Feature: domain Description: HNHc Note: nucleases Location: 3335-3473 bp Feature: domain Description: HNHc Note: nucleases Location: 3335-3473 bp Feature: gene Location: 4044-4202 bp Feature: gene Location: 4315-4599 bp Feature: domain Description: recJ Location: 4402-4585 bp Feature: domain Description: recJ Location: 4402-4585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recJ (TIGR00644), ssDNA-exonuc_C (pfam10141), RVT-GII, HNHc (smart00507)

Seq: NMYT01002666.1 Bacillus cereus strain SJ-S7 s_0_7_trimmed_nodup_SPAdes_2109_len_T:7062, whole genome shotgun sequence (7062 bp)
Overview 1 RT 1: 1-5152 bp Neighborhood of RT #1 [1, 5229] TraC-F-type RVT-GII HNHc TraC-F-type Feature: gene Location: 1-420 bp Feature: gene Location: 451-1419 bp Feature: domain Description: TraC-F-type Location: 478-1258 bp Feature: domain Description: TraC-F-type Location: 47 8-1258 bp Feature: gene Location: 1710-3542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2010-2715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2010-27 15 bp Feature: domain Description: HNHc Note: nucleases Location: 3294-3426 bp Feature: domain Description: HNHc Note: nucleases Location: 3294-3426 bp Feature: gene Location: 3826-3984 bp Feature: gene Location: 4258-5229 bp Feature: domain Description: TraC-F-type Location: 4678-5152 bp Feature: domain Description: TraC-F-type Location: 467 8-5152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), TraC-F-type (TIGR02746)

Seq: NMYT01001439.1 Bacillus cereus strain SJ-S7 s_0_7_trimmed_nodup_SPAdes_2721_len_New_1:2825, whole genome shotgun sequence (2825 bp)
Overview 1 RT 1: 966-2681 bp Neighborhood of RT #1 [966, 2824] RVT-GII Feature: gene Location: 966-1292 bp Feature: gene Location: 1326-1466 bp Feature: gene Location: 1661-2824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1979-2681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1979-268 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NMYT01002414.1 Bacillus cereus strain SJ-S7 s_0_7_trimmed_nodup_SPAdes_3144_len:3814, whole genome shotgun sequence (3780 bp)
Overview 1 RT 1: 13-3778 bp Neighborhood of RT #1 [13, 3778] nuc_hydro RVT_N RVT-GII GIIM Feature: gene Location: 13-984 bp Feature: domain Description: nuc_hydro Location: 49-955 bp Feature: domain Description: nuc_hydro Location: 49 -9 55 bp Feature: gene Location: 1704-3350 bp Feature: RT Description: RVT_N Location: 1746-1983 bp Feature: RT Description: RVT_N Location: 1746-19 83 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2037-2697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2037-269 7 bp Feature: domain Description: GIIM Note: maturase Location: 2766-2997 bp Feature: domain Description: GIIM Note: maturase Location: 2766-29 9 7 bp Feature: gene Location: 3563-3778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nuc_hydro (cl00226), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: NMYT01003308.1 Bacillus cereus strain SJ-S7 s_0_7_trimmed_nodup_SPAdes_948_len:7573, whole genome shotgun sequence (7521 bp)
Overview 1 RT 1: 2751-7148 bp Neighborhood of RT #1 [2751, 7519] Acetyltransf_10 UvrD RVT-GII Intron_maturas2 HNHc UvrD Feature: gene Location: 2751-3173 bp Feature: domain Description: Acetyltransf_10 Location: 2814-3171 bp Feature: domain Description: Acetyltransf_10 Location: 2814-3171 bp Feature: gene Location: 3273-4064 bp Feature: domain Description: UvrD Location: 3426-4053 bp Feature: domain Description: UvrD Location: 3426-4053 bp Feature: gene Location: 4638-6476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4902-5754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4902-5754 bp Feature: domain Description: Intron_maturas2 Location: 5850-6183 bp Feature: domain Description: Intron_maturas2 Location: 5850-6183 bp Feature: domain Description: HNHc Note: nucleases Location: 6294-6447 bp Feature: domain Description: HNHc Note: nucleases Location: 6294-6447 bp Feature: gene Location: 6608-7519 bp Feature: domain Description: UvrD Location: 6611-7148 bp Feature: domain Description: UvrD Location: 6611-7148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_10 (pfam13673), UvrD (COG0210), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)