myRT

myRT report for GCA_002807415.1_ASM280741v1

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Seq: NMYF01000075.1 Bacillus cereus strain SJ-S28 s_2_28_CLC_43_len:2681, whole genome shotgun sequence (2681 bp)
Overview 1 RT 1: 116-2390 bp Neighborhood of RT #1 [116, 2390] RVT-GII HNHc Feature: gene Location: 116-1948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 6-1 1 21 bp Feature: domain Description: HNHc Note: nucleases Location: 1700-1832 bp Feature: domain Description: HNHc Note: nucleases Location: 1 700-1 832 bp Feature: gene Location: 2232-2390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NMYF01000091.1 Bacillus cereus strain SJ-S28 s_2_28_trimmed_SPAdes_33_len:147588, whole genome shotgun sequence (147588 bp)
Overview 1 RT 1: 17553-25505 bp 2 RT 2: 33578-40262 bp 3 RT 3: 115681-119443 bp Neighborhood of RT #1 [17553, 26236] xerC TraG-D_C RVT-GII Intron_maturas2 HNHc Replic_Relax Neighborhood of RT #2 [33578, 40270] HTH_XRE RVT-GII GIIM HNHc DUF3854 PCYCGC Neighborhood of RT #3 [115681, 119443] E1_enzyme_family RVT-GII HNHc Feature: gene Location: 17553-18527 bp Feature: domain Description: xerC Location: 17580-18429 bp Feature: domain Description: xerC Location: 17580-1842 9 bp Feature: gene Location: 19094-20491 bp Feature: domain Description: TraG-D_C Location: 19238-19601 bp Feature: domain Description: TraG-D_C Location: 192 38-19601 bp Feature: gene Location: 20595-22412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20859-21690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0859-2 1690 bp Feature: domain Description: Intron_maturas2 Location: 21768-22062 bp Feature: domain Description: Intron_maturas2 Location: 2 1768-2 2 062 bp Feature: domain Description: HNHc Note: nucleases Location: 22209-22386 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 2 09-2 2 386 bp Feature: gene Location: 23026-24714 bp Feature: gene Location: 24686-26236 bp Feature: domain Description: Replic_Relax Location: 24782-25505 bp Feature: domain Description: Replic_Relax Location: 2 4782 -2 5505 bp Feature: gene Location: 33578-33820 bp Feature: domain Description: HTH_XRE Location: 33647-33785 bp Feature: domain Description: HTH_XRE Location: 33647-33785 bp Feature: gene Location: 33813-35372 bp Feature: gene Location: 36360-38255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36726-37425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3672 6-3742 5 bp Feature: domain Description: GIIM Note: maturase Location: 37509-37752 bp Feature: domain Description: GIIM Note: maturase Location: 37509-37752 bp Feature: domain Description: HNHc Note: nucleases Location: 37998-38136 bp Feature: domain Description: HNHc Note: nucleases Location: 37998-38136 bp Feature: gene Location: 38260-39531 bp Feature: domain Description: DUF3854 Location: 39178-39499 bp Feature: domain Description: DUF3854 Location: 39178-39499 bp Feature: gene Location: 39752-40270 bp Feature: domain Description: PCYCGC Location: 39827-40262 bp Feature: domain Description: PCYCGC Location: 3982 7-402 62 bp Feature: gene Location: 115681-116082 bp Feature: domain Description: E1_enzyme_family Location: 115729-116065 bp Feature: domain Description: E1_enzyme_family Location: 11572 9-116065 bp Feature: gene Location: 116376-116510 bp Feature: gene Location: 116782-118662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117112-117841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117112 -117841 bp Feature: domain Description: HNHc Note: nucleases Location: 118399-118549 bp Feature: domain Description: HNHc Note: nucleases Location: 118399-118549 bp Feature: gene Location: 118726-119253 bp Feature: gene Location: 119315-119443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT xerC (PRK01287), TraG-D_C (pfam12696), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Replic_Relax (pfam13814), HTH_XRE (smart00530), GIIM (pfam08388), DUF3854 (pfam12965), PCYCGC (pfam13798)
E1_enzyme_family (cl22428)

Seq: NMYF01000056.1 Bacillus cereus strain SJ-S28 s_2_28_trimmed_SPAdes_41_len:39682, whole genome shotgun sequence (39682 bp)
Overview 1 RT 1: 36144-39210 bp Neighborhood of RT #1 [36144, 39563] RimL RVT_N RVT-GII GIIM Feature: gene Location: 36144-36278 bp Feature: gene Location: 36733-37278 bp Feature: domain Description: RimL Location: 36751-37264 bp Feature: domain Description: RimL Location: 3 6751-3 7264 bp Feature: gene Location: 37917-39563 bp Feature: RT Description: RVT_N Location: 37959-38196 bp Feature: RT Description: RVT_N Location: 3 7959-3 8196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38250-38910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 8250-3 8910 bp Feature: domain Description: GIIM Note: maturase Location: 38979-39210 bp Feature: domain Description: GIIM Note: maturase Location: 3 8979-3 9210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: NMYF01000038.1 Bacillus cereus strain SJ-S28 s_2_28_trimmed_nodup_SPAdes_26_len:84205, whole genome shotgun sequence (84205 bp)
Overview 1 RT 1: 53129-57425 bp Neighborhood of RT #1 [53129, 57478] ComJ RVT-GII Intron_maturas2 HNHc HTH_MlrA-like_sg1 DUF3967 Feature: gene Location: 53129-53518 bp Feature: domain Description: ComJ Location: 53135-53507 bp Feature: domain Description: ComJ Location: 53135-53507 bp Feature: gene Location: 53555-53719 bp Feature: gene Location: 53787-55580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54030-54861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54 030-54 861 bp Feature: domain Description: Intron_maturas2 Location: 54942-55230 bp Feature: domain Description: Intron_maturas2 Location: 54 94 2-55230 bp Feature: domain Description: HNHc Note: nucleases Location: 55410-55551 bp Feature: domain Description: HNHc Note: nucleases Location: 554 10-55551 bp Feature: gene Location: 56185-56514 bp Feature: gene Location: 56726-57478 bp Feature: domain Description: HTH_MlrA-like_sg1 Location: 56744-56900 bp Feature: domain Description: HTH_MlrA-like_sg1 Location: 5674 4 -56900 bp Feature: domain Description: DUF3967 Location: 57332-57425 bp Feature: domain Description: DUF3967 Location: 57332-574 25 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ComJ (pfam11033), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), HTH_MlrA-like_sg1 (cd04764), DUF3967 (pfam13152)