myRT

myRT report for GCA_002807445.1_ASM280744v1

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Seq: NMYG01000162.1 Bacillus cereus strain SJ-S27 s_2_27_CLC_394_len:78930, whole genome shotgun sequence (78930 bp)
Overview 1 RT 1: 34618-46233 bp 2 RT 2: 56549-62519 bp 3 RT 3: 68319-73128 bp Neighborhood of RT #1 [34618, 46233] HELICc RVT-GII HNHc DEXDc MTS RVT-GII HNHc Neighborhood of RT #2 [56549, 62519] PRK06850 HEPN RVT-GII NT_KNTase_like Neighborhood of RT #3 [68319, 73133] beta_clamp RVT-GII COG4712 Feature: gene Location: 34618-35331 bp Feature: gene Location: 35348-37030 bp Feature: domain Description: HELICc Location: 36014-36413 bp Feature: domain Description: HELICc Location: 3601 4-3641 3 bp Feature: gene Location: 37091-38890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37394-38096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37394-38096 bp Feature: domain Description: HNHc Note: nucleases Location: 38621-38771 bp Feature: domain Description: HNHc Note: nucleases Location: 38621 -38771 bp Feature: gene Location: 39591-41270 bp Feature: domain Description: DEXDc Location: 40371-41244 bp Feature: domain Description: DEXDc Location: 40371 -41 244 bp Feature: gene Location: 41342-41569 bp Feature: gene Location: 41585-42706 bp Feature: domain Description: MTS Location: 41681-42044 bp Feature: domain Description: MTS Location: 41 681 -42044 bp Feature: gene Location: 42851-44779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43172-43907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431 72-43907 bp Feature: domain Description: HNHc Note: nucleases Location: 44498-44663 bp Feature: domain Description: HNHc Note: nucleases Location: 44498-44663 bp Feature: gene Location: 45661-45804 bp Feature: gene Location: 45820-46233 bp Feature: gene Location: 56549-58321 bp Feature: domain Description: PRK06850 Location: 56564-57794 bp Feature: domain Description: PRK06850 Location: 56564-57794 bp Feature: gene Location: 58446-58889 bp Feature: domain Description: HEPN Location: 58500-58848 bp Feature: domain Description: HEPN Location: 58500-58848 bp Feature: gene Location: 59035-60966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59356-60091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59356-60091 bp Feature: gene Location: 61725-62126 bp Feature: domain Description: NT_KNTase_like Location: 61800-62103 bp Feature: domain Description: NT_KNTase_like Location: 61 800-621 03 bp Feature: gene Location: 62148-62519 bp Feature: gene Location: 68319-69431 bp Feature: domain Description: beta_clamp Location: 68322-69426 bp Feature: domain Description: beta_clamp Location: 68322-69426 bp Feature: gene Location: 69512-70039 bp Feature: gene Location: 70117-72018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70435-71137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70435-71 1 37 bp Feature: gene Location: 72213-72353 bp Feature: gene Location: 72777-73133 bp Feature: domain Description: COG4712 Location: 72786-73128 bp Feature: domain Description: COG471 2 Location: 72786-731 28 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HELICc (smart00490), RVT-GII, HNHc (smart00507), DEXDc (smart00487), MTS (pfam05175), PRK06850 (hypothetical protein; Provisional), HEPN (smart00748), NT_KNTase_like (cd05403), beta_clamp (cl29549), COG4712 (Uncharacterized protein )

Seq: NMYG01000005.1 Bacillus cereus strain SJ-S27 s_2_27_raw_SPAdes_188_len_T:351, whole genome shotgun sequence (351 bp)
Overview 1 RT 1: 2-278 bp Neighborhood of RT #1 [2, 349] RVT-GII Feature: gene Location: 2-349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41-278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41-2 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NMYG01000102.1 Bacillus cereus strain SJ-S27 s_2_27_trimmed_SPAdes_63_len:2681, whole genome shotgun sequence (2681 bp)
Overview 1 RT 1: 116-2390 bp Neighborhood of RT #1 [116, 2390] RVT-GII HNHc Feature: gene Location: 116-1948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1121 bp Feature: domain Description: HNHc Note: nucleases Location: 1700-1832 bp Feature: domain Description: HNHc Note: nucleases Location: 1700-183 2 bp Feature: gene Location: 2232-2390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NMYG01000112.1 Bacillus cereus strain SJ-S27 s_2_27_trimmed_nodup_SPAdes_17_len:149286, whole genome shotgun sequence (149286 bp)
Overview 1 RT 1: 66248-70937 bp Neighborhood of RT #1 [66248, 70937] Excalibur PRK09418 RVT_N RVT-GII GIIM RimL Feature: gene Location: 66248-66835 bp Feature: domain Description: Excalibur Location: 66344-66461 bp Feature: domain Description: Excalibur Location: 6634 4 -664 61 bp Feature: domain Description: PRK09418 Location: 66482-66830 bp Feature: domain Description: PRK094 18 Location: 664 82-66830 bp Feature: gene Location: 67164-67421 bp Feature: gene Location: 67518-69164 bp Feature: RT Description: RVT_N Location: 67560-67797 bp Feature: RT Description: RVT_N Location: 67560-67797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67851-68511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67851-68511 bp Feature: domain Description: GIIM Note: maturase Location: 68580-68811 bp Feature: domain Description: GIIM Note: maturase Location: 68580-68811 bp Feature: gene Location: 69803-70348 bp Feature: domain Description: RimL Location: 69821-70334 bp Feature: domain Description: RimL Location: 69821-70334 bp Feature: gene Location: 70803-70937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Excalibur (smart00894), PRK09418 (bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), RimL (COG1670)

Seq: NMYG01000231.1 Bacillus cereus strain SJ-S27 s_2_27_trimmed_nodup_SPAdes_7_len:225255, whole genome shotgun sequence (225255 bp)
Overview 1 RT 1: 461-5578 bp Neighborhood of RT #1 [461, 5580] DUF2614 Acetyltransf_10 RVT-GII Fur Bcp Feature: gene Location: 461-817 bp Feature: domain Description: DUF2614 Location: 473-803 bp Feature: domain Description: DUF2614 Location: 473-803 bp Feature: gene Location: 924-1367 bp Feature: domain Description: Acetyltransf_10 Location: 1062-1329 bp Feature: domain Description: Acetyltransf_10 Location: 1062-1329 bp Feature: gene Location: 1424-3364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1745-2477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1745 -2477 bp Feature: gene Location: 4396-4830 bp Feature: domain Description: Fur Location: 4414-4825 bp Feature: domain Description: Fur Location: 4414-4825 bp Feature: gene Location: 5125-5580 bp Feature: domain Description: Bcp Location: 5128-5578 bp Feature: domain Description: Bcp Location: 5 128-5 5 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Fur (COG0735), DUF2614 (pfam11023), Acetyltransf_10 (pfam13673)