myRT

myRT report for GCA_002807475.1_ASM280747v1

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Seq: NMYH01001838.1 Bacillus cereus strain SJ-S26 s_2_26_CLC_1085_len_T:1191, whole genome shotgun sequence (1191 bp)
Overview 1 RT 1: 1-805 bp Neighborhood of RT #1 [1, 1188] RVT-GII Feature: gene Location: 1-1188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70-805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70-805 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NMYH01001000.1 Bacillus cereus strain SJ-S26 s_2_26_CLC_5089_len:173263, whole genome shotgun sequence (173263 bp)
Overview 1 RT 1: 28140-31885 bp 2 RT 2: 107310-113761 bp 3 RT 3: 121347-129932 bp 4 RT 4: 145726-151429 bp Neighborhood of RT #1 [28140, 31902] RVT-GII HNHc E1_enzyme_family Neighborhood of RT #2 [107310, 113761] PCYCGC DUF3854 RVT-GII GIIM HNHc Neighborhood of RT #3 [121347, 130030] Replic_Relax RVT-GII Intron_maturas2 HNHc TraG-D_C xerC Neighborhood of RT #4 [145726, 151429] TraC-F-type AAA_10 RVT-GII HNHc AAA_10 Feature: gene Location: 28140-28268 bp Feature: gene Location: 28330-28857 bp Feature: gene Location: 28921-30801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29251-29980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 92 51-2 9980 bp Feature: domain Description: HNHc Note: nucleases Location: 30538-30688 bp Feature: domain Description: HNHc Note: nucleases Location: 30538-30688 bp Feature: gene Location: 31073-31207 bp Feature: gene Location: 31501-31902 bp Feature: domain Description: E1_enzyme_family Location: 31549-31885 bp Feature: domain Description: E1_enzyme_family Location: 31549-31885 bp Feature: gene Location: 107310-107831 bp Feature: domain Description: PCYCGC Location: 107388-107823 bp Feature: domain Description: PCYCGC Location: 107388-10782 3 bp Feature: gene Location: 108052-109323 bp Feature: domain Description: DUF3854 Location: 108970-109291 bp Feature: domain Description: DUF3854 Location: 108970-1092 91 bp Feature: gene Location: 109328-111223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109694-110393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109694-110393 bp Feature: domain Description: GIIM Note: maturase Location: 110477-110720 bp Feature: domain Description: GIIM Note: maturase Location: 110477-11072 0 bp Feature: domain Description: HNHc Note: nucleases Location: 110966-111104 bp Feature: domain Description: HNHc Note: nucleases Location: 110966-111104 bp Feature: gene Location: 111892-112035 bp Feature: gene Location: 112211-113761 bp Feature: gene Location: 121347-122897 bp Feature: domain Description: Replic_Relax Location: 121443-122166 bp Feature: domain Description: Replic_Relax Location: 12 1443-12 2 166 bp Feature: gene Location: 122869-124557 bp Feature: gene Location: 125171-126988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125435-126266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 5435-12 62 66 bp Feature: domain Description: Intron_maturas2 Location: 126344-126638 bp Feature: domain Description: Intron_maturas2 Location: 12 6344-12 6638 bp Feature: domain Description: HNHc Note: nucleases Location: 126785-126962 bp Feature: domain Description: HNHc Note: nucleases Location: 12 6785-12 6962 bp Feature: gene Location: 127092-128489 bp Feature: domain Description: TraG-D_C Location: 127236-127599 bp Feature: domain Description: TraG-D_C Location: 12 72 36-12 7599 bp Feature: gene Location: 129056-130030 bp Feature: domain Description: xerC Location: 129083-129932 bp Feature: domain Description: xerC Location: 12 9083-12 9932 bp Feature: gene Location: 145726-147261 bp Feature: domain Description: TraC-F-type Location: 146416-146914 bp Feature: domain Description: TraC-F-type Location: 146416-146914 bp Feature: domain Description: AAA_10 Location: 147067-147244 bp Feature: domain Description: AAA_10 Location: 147067-1472 44 bp Feature: gene Location: 147408-147584 bp Feature: gene Location: 147977-149809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148277-148982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1482 77-148982 bp Feature: domain Description: HNHc Note: nucleases Location: 149561-149693 bp Feature: domain Description: HNHc Note: nucleases Location: 149561-149693 bp Feature: gene Location: 150067-150945 bp Feature: domain Description: AAA_10 Location: 150073-150829 bp Feature: domain Description: AAA_10 Location: 150073-15082 9 bp Feature: gene Location: 150947-151429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), E1_enzyme_family (cl22428), PCYCGC (pfam13798), DUF3854 (pfam12965), GIIM (pfam08388), Replic_Relax (pfam13814), Intron_maturas2 (pfam01348), TraG-D_C (pfam12696), xerC (PRK01287)
TraC-F-type (TIGR02746), AAA_10 (pfam12846)

Seq: NMYH01000410.1 Bacillus cereus strain SJ-S26 s_2_26_CLC_5109_len:1571, whole genome shotgun sequence (1571 bp)
Overview 1 RT 1: 55-1571 bp Neighborhood of RT #1 [55, 1570] RVT-GII Feature: gene Location: 55-213 bp Feature: gene Location: 695-1570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 953-1571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 953 -1571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NMYH01000017.1 Bacillus cereus strain SJ-S26 s_2_26_CLC_582_len:6196, whole genome shotgun sequence (6196 bp)
Overview 1 RT 1: 1-5459 bp Neighborhood of RT #1 [1, 5459] RVT-GII GIIM HNH RVT-GII HNHc Feature: gene Location: 1-1119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-316 bp Feature: domain Description: GIIM Note: maturase Location: 379-613 bp Feature: domain Description: GIIM Note: maturase Location: 379-613 bp Feature: domain Description: HNH Note: nucleases Location: 853-988 bp Feature: domain Description: HNH Note: nucleases Location: 853-988 bp Feature: gene Location: 1971-3869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2295-3033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2295-3033 bp Feature: domain Description: HNHc Note: nucleases Location: 3612-3759 bp Feature: domain Description: HNHc Note: nucleases Location: 3612-3759 bp Feature: gene Location: 4202-4744 bp Feature: gene Location: 4761-5459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNH (pfam01844), HNHc (smart00507)

Seq: NMYH01002179.1 Bacillus cereus strain SJ-S26 s_2_26_raw_SPAdes_101_len:3227, whole genome shotgun sequence (3227 bp)
Overview 1 RT 1: 3-3197 bp Neighborhood of RT #1 [3, 3226] UvrD UvrD RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3-1481 bp Feature: domain Description: UvrD Location: 6-543 bp Feature: domain Description: UvrD Location: 6-5 43 bp Feature: domain Description: UvrD Location: 813-1251 bp Feature: domain Description: UvrD Location: 813-125 1 bp Feature: gene Location: 1613-3226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1652-2504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165 2-25 04 bp Feature: domain Description: Intron_maturas2 Location: 2600-2936 bp Feature: domain Description: Intron_maturas2 Location: 2600-2936 bp Feature: domain Description: HNHc Note: nucleases Location: 3044-3197 bp Feature: domain Description: HNHc Note: nucleases Location: 3044-3197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), UvrD (COG0210)

Seq: NMYH01000025.1 Bacillus cereus strain SJ-S26 s_2_26_raw_SPAdes_1048_len:688, whole genome shotgun sequence (688 bp)
Overview 1 RT 1: 2-686 bp Neighborhood of RT #1 [2, 685] RVT_N RVT-GII Feature: gene Location: 2-685 bp Feature: RT Description: RVT_N Location: 17-263 bp Feature: RT Description: RVT_N Location: 17-26 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 317-686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 317-6 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: NMYH01001918.1 Bacillus cereus strain SJ-S26 s_2_26_raw_SPAdes_272_len:1458, whole genome shotgun sequence (1458 bp)
Overview 1 RT 1: 2-1335 bp Neighborhood of RT #1 [2, 1457] RecJ RVT-GII HNHc Feature: gene Location: 2-502 bp Feature: domain Description: RecJ Note: exonuclease Location: 92-503 bp Feature: domain Description: RecJ Note: exonuclease Location: 92-503 bp Feature: gene Location: 519-1457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 525-627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 525-627 bp Feature: domain Description: HNHc Note: nucleases Location: 1197-1335 bp Feature: domain Description: HNHc Note: nucleases Location: 1197 -1335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RecJ (COG4199), RVT-GII, HNHc (smart00507)

Seq: NMYH01001672.1 Bacillus cereus strain SJ-S26 s_2_26_raw_SPAdes_87_len:4395, whole genome shotgun sequence (4395 bp)
Overview 1 RT 1: 201-4392 bp Neighborhood of RT #1 [201, 4394] RVT-GII beta_clamp Feature: gene Location: 201-527 bp Feature: gene Location: 561-701 bp Feature: gene Location: 896-2797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1214-1916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1214-1916 bp Feature: gene Location: 2875-3402 bp Feature: gene Location: 3483-4394 bp Feature: domain Description: beta_clamp Location: 3486-4392 bp Feature: domain Description: beta_clamp Location: 348 6-4392 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT beta_clamp (cl29549), RVT-GII

Seq: NMYH01001833.1 Bacillus cereus strain SJ-S26 s_2_26_trimmed_nodup_SPAdes_77_len:2373, whole genome shotgun sequence (2373 bp)
Overview 1 RT 1: 109-2006 bp Neighborhood of RT #1 [109, 2006] RVT_N RVT-GII GIIM Feature: gene Location: 109-1755 bp Feature: RT Description: RVT_N Location: 151-388 bp Feature: RT Description: RVT_N Location: 151-388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442-1102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442-1102 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1402 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1402 bp Feature: gene Location: 1803-2006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)