myRT

myRT report for GCA_002807505.1_ASM280750v1

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Seq: NMYI01000025.1 Bacillus cereus strain SJ-S25 s_2_25_raw_SPAdes_11_len:141893, whole genome shotgun sequence (141893 bp)
Overview 1 RT 1: 32549-44873 bp Neighborhood of RT #1 [32549, 44908] B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat RVT-GII HNHc B_ant_repeat B_ant_repeat B_ant_repeat CcdC Feature: gene Location: 32549-33622 bp Feature: gene Location: 33895-40260 bp Feature: domain Description: B_ant_repeat Location: 33904-34039 bp Feature: domain Description: B_ant_repeat Location: 33904-34039 bp Feature: domain Description: B_ant_repeat Location: 34279-34432 bp Feature: domain Description: B_ant_repeat Location: 34279-34432 bp Feature: domain Description: B_ant_repeat Location: 34669-34822 bp Feature: domain Description: B_ant_repeat Location: 34669-34822 bp Feature: domain Description: B_ant_repeat Location: 35062-35215 bp Feature: domain Description: B_ant_repeat Location: 35062-3521 5 bp Feature: domain Description: B_ant_repeat Location: 35458-35614 bp Feature: domain Description: B_ant_repeat Location: 35458-3561 4 bp Feature: domain Description: B_ant_repeat Location: 35854-36010 bp Feature: domain Description: B_ant_repeat Location: 35854-3601 0 bp Feature: domain Description: B_ant_repeat Location: 36250-36406 bp Feature: domain Description: B_ant_repeat Location: 36250-36406 bp Feature: domain Description: B_ant_repeat Location: 36646-36799 bp Feature: domain Description: B_ant_repeat Location: 36646-36799 bp Feature: domain Description: B_ant_repeat Location: 37042-37198 bp Feature: domain Description: B_ant_repeat Location: 37042-371 98 bp Feature: domain Description: B_ant_repeat Location: 37438-37594 bp Feature: domain Description: B_ant_repeat Location: 37438-37594 bp Feature: domain Description: B_ant_repeat Location: 37834-37990 bp Feature: domain Description: B_ant_repeat Location: 37834-37990 bp Feature: domain Description: B_ant_repeat Location: 38230-38383 bp Feature: domain Description: B_ant_repeat Location: 38230-38383 bp Feature: domain Description: B_ant_repeat Location: 38626-38779 bp Feature: domain Description: B_ant_repeat Location: 38626-38779 bp Feature: domain Description: B_ant_repeat Location: 39022-39178 bp Feature: domain Description: B_ant_repeat Location: 39022-391 78 bp Feature: domain Description: B_ant_repeat Location: 39418-39574 bp Feature: domain Description: B_ant_repeat Location: 3941 8-39574 bp Feature: domain Description: B_ant_repeat Location: 39814-39970 bp Feature: domain Description: B_ant_repeat Location: 3981 4-39970 bp Feature: gene Location: 40429-42357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40750-41485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40750-41 485 bp Feature: domain Description: HNHc Note: nucleases Location: 42076-42241 bp Feature: domain Description: HNHc Note: nucleases Location: 42076-42241 bp Feature: gene Location: 43059-44339 bp Feature: domain Description: B_ant_repeat Location: 43137-43248 bp Feature: domain Description: B_ant_repeat Location: 431 37-43248 bp Feature: domain Description: B_ant_repeat Location: 43488-43644 bp Feature: domain Description: B_ant_repeat Location: 43488-43644 bp Feature: domain Description: B_ant_repeat Location: 43887-44043 bp Feature: domain Description: B_ant_repeat Location: 43887-44043 bp Feature: gene Location: 44402-44908 bp Feature: domain Description: CcdC Location: 44411-44873 bp Feature: domain Description: CcdC Location: 4441 1 -44873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT B_ant_repeat (TIGR01451), RVT-GII, HNHc (smart00507), CcdC (COG4846)

Seq: NMYI01000005.1 Bacillus cereus strain SJ-S25 s_2_25_trimmed_SPAdes_11_len:137696, whole genome shotgun sequence (137696 bp)
Overview 1 RT 1: 81835-91394 bp Neighborhood of RT #1 [81835, 91394] RVT-GII HNHc RVT_N RVT-GII GIIM HNH DEXDc Feature: gene Location: 81835-82533 bp Feature: gene Location: 82550-83305 bp Feature: gene Location: 83425-85323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83749-84487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83749-84487 bp Feature: domain Description: HNHc Note: nucleases Location: 85066-85213 bp Feature: domain Description: HNHc Note: nucleases Location: 85066-852 13 bp Feature: gene Location: 86175-87986 bp Feature: RT Description: RVT_N Location: 86229-86475 bp Feature: RT Description: RVT_N Location: 862 2 9-86475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86529-87183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8652 9-87183 bp Feature: domain Description: GIIM Note: maturase Location: 87246-87480 bp Feature: domain Description: GIIM Note: maturase Location: 872 46-87480 bp Feature: domain Description: HNH Note: nucleases Location: 87720-87855 bp Feature: domain Description: HNH Note: nucleases Location: 8772 0-87855 bp Feature: gene Location: 88558-91143 bp Feature: domain Description: DEXDc Location: 89335-90289 bp Feature: domain Description: DEXDc Location: 89335-902 89 bp Feature: gene Location: 91203-91394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), RVT_N (pfam13655), GIIM (pfam08388), HNH (pfam01844), DEXDc (smart00487)

Seq: NMYI01000004.1 Bacillus cereus strain SJ-S25 s_2_25_trimmed_SPAdes_3_len:207217, whole genome shotgun sequence (207217 bp)
Overview 1 RT 1: 8110-12591 bp Neighborhood of RT #1 [8110, 12713] RVT-GII SalY YkvA Feature: gene Location: 8110-8436 bp Feature: gene Location: 8470-8610 bp Feature: gene Location: 8805-10706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9123-9825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9123 -9825 bp Feature: gene Location: 10902-11897 bp Feature: domain Description: SalY Location: 10986-11886 bp Feature: domain Description: SalY Location: 10986-11886 bp Feature: gene Location: 12378-12713 bp Feature: domain Description: YkvA Location: 12384-12591 bp Feature: domain Description: YkvA Location: 123 84-12591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SalY (COG0577), YkvA (COG3339), RVT-GII

Seq: NMYI01000007.1 Bacillus cereus strain SJ-S25 s_2_25_trimmed_SPAdes_9_len:241045, whole genome shotgun sequence (241045 bp)
Overview 1 RT 1: 101079-106996 bp Neighborhood of RT #1 [101079, 107199] MTAN RVT_N RVT-GII GIIM HTH_3 TPR_12 Hydrolase_4 Feature: gene Location: 101079-101261 bp Feature: gene Location: 101648-102319 bp Feature: domain Description: MTAN Location: 101654-102248 bp Feature: domain Description: MTAN Location: 101654 -10224 8 bp Feature: gene Location: 103031-104677 bp Feature: RT Description: RVT_N Location: 103073-103310 bp Feature: RT Description: RVT_N Location: 103073-103310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103364-104024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103364 -104 024 bp Feature: domain Description: GIIM Note: maturase Location: 104093-104324 bp Feature: domain Description: GIIM Note: maturase Location: 104 093-104 324 bp Feature: gene Location: 105037-106161 bp Feature: domain Description: HTH_3 Location: 105067-105229 bp Feature: domain Description: HTH_3 Location: 105067-105229 bp Feature: domain Description: TPR_12 Location: 105832-105925 bp Feature: domain Description: TPR_12 Location: 105832-105925 bp Feature: gene Location: 106171-107199 bp Feature: domain Description: Hydrolase_4 Location: 106336-106996 bp Feature: domain Description: Hydrolase_4 Location: 106336-106996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MTAN (cd09008), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_3 (pfam01381), TPR_12 (pfam13424), Hydrolase_4 (pfam12146)

Seq: NMYI01000018.1 Bacillus cereus strain SJ-S25 s_2_25_trimmed_nodup_SPAdes_25_len:438843, whole genome shotgun sequence (438843 bp)
Overview 1 RT 1: 118508-124063 bp Neighborhood of RT #1 [118508, 124068] recJ RVT-GII HNHc recJ ssDNA-exonuc_C PRK02304 Feature: gene Location: 118508-118792 bp Feature: domain Description: recJ Location: 118595-118778 bp Feature: domain Description: recJ Location: 1185 95 -118778 bp Feature: gene Location: 118905-119063 bp Feature: gene Location: 119545-121338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119803-120508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119803-1205 08 bp Feature: domain Description: HNHc Note: nucleases Location: 121078-121216 bp Feature: domain Description: HNHc Note: nucleases Location: 121078-121216 bp Feature: gene Location: 121355-123508 bp Feature: domain Description: recJ Location: 121445-122855 bp Feature: domain Description: recJ Location: 121445 -12285 5 bp Feature: domain Description: ssDNA-exonuc_C Location: 122873-123467 bp Feature: domain Description: ssDNA-exonuc_C Location: 122873-123467 bp Feature: gene Location: 123556-124068 bp Feature: domain Description: PRK02304 Location: 123559-124063 bp Feature: domain Description: PRK02304 Location: 1235 5 9-124063 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recJ (TIGR00644), RVT-GII, HNHc (smart00507), ssDNA-exonuc_C (pfam10141), PRK02304 (adenine phosphoribosyltransferase; Provisional)

Seq: NMYI01000036.1 Bacillus cereus strain SJ-S25 s_2_25_trimmed_nodup_SPAdes_4_len:571599, whole genome shotgun sequence (571599 bp)
Overview 1 RT 1: 344047-349762 bp Neighborhood of RT #1 [344047, 349773] Acetyltransf_10 UvrD RVT-GII Intron_maturas2 HNHc UvrD Spore-coat_CotZ Feature: gene Location: 344047-344469 bp Feature: domain Description: Acetyltransf_10 Location: 344110-344467 bp Feature: domain Description: Acetyltransf_10 Location: 344110-34446 7 bp Feature: gene Location: 344569-345360 bp Feature: domain Description: UvrD Location: 344722-345349 bp Feature: domain Description: UvrD Location: 344722-345349 bp Feature: gene Location: 345934-347772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 346198-347050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 346 198-347050 bp Feature: domain Description: Intron_maturas2 Location: 347146-347479 bp Feature: domain Description: Intron_maturas2 Location: 347146 -347479 bp Feature: domain Description: HNHc Note: nucleases Location: 347590-347743 bp Feature: domain Description: HNHc Note: nucleases Location: 347590-347743 bp Feature: gene Location: 347910-349163 bp Feature: domain Description: UvrD Location: 347913-349146 bp Feature: domain Description: UvrD Location: 347913-349146 bp Feature: gene Location: 349306-349773 bp Feature: domain Description: Spore-coat_CotZ Location: 349318-349762 bp Feature: domain Description: Spore-coat_CotZ Location: 349318-34976 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_10 (pfam13673), UvrD (COG0210), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Spore-coat_CotZ (pfam10612)