myRT

myRT report for GCA_002810695.1_ASM281069v1

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Seq: PIOQ01000187.1 Escherichia coli strain KCJK6238 NODE_162_length_1142_cov_33.9911_ID_323, whole genome shotgun sequence (1142 bp)
Overview 1 RT 1: 124-1141 bp Neighborhood of RT #1 [124, 1140] RVT-GII Feature: gene Location: 124-1140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 577-1141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 577-1 1 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PIOQ01000197.1 Escherichia coli strain KCJK6238 NODE_174_length_819_cov_26.9162_ID_347, whole genome shotgun sequence (819 bp)
Overview 1 RT 1: 3-767 bp Neighborhood of RT #1 [3, 787] RVT-GII DUF4376 Feature: gene Location: 3-131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 -12 9 bp Feature: gene Location: 209-787 bp Feature: domain Description: DUF4376 Location: 446-767 bp Feature: domain Description: DUF4376 Location: 446-767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF4376 (pfam14301)

Seq: PIOQ01000131.1 Escherichia coli strain KCJK6238 NODE_21_length_78132_cov_8.60632_ID_41, whole genome shotgun sequence (78132 bp)
Overview 1 RT 1: 65305-71537 bp Neighborhood of RT #1 [65305, 71674] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 65305-65559 bp Feature: domain Description: Phage_integrase Location: 65371-65467 bp Feature: domain Description: Phage_integrase Location: 653 71-65467 bp Feature: gene Location: 65642-66112 bp Feature: gene Location: 66459-69668 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 66987-67476 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 66987-67476 bp Feature: domain Description: nitrilase Location: 68982-69579 bp Feature: domain Description: nitrilase Location: 68982-69579 bp Feature: gene Location: 69985-70767 bp Feature: domain Description: AbiEi_3_N Location: 69991-70258 bp Feature: domain Description: AbiEi_3 _N Location: 69991-70258 bp Feature: domain Description: AbiEi_3 Location: 70270-70726 bp Feature: domain Description: AbiEi_3 Location: 70270-70726 bp Feature: gene Location: 70754-71674 bp Feature: domain Description: AbiEii Location: 70796-71537 bp Feature: domain Description: AbiEii Location: 70796-7153 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: PIOQ01000003.1 Escherichia coli strain KCJK6238 NODE_229_length_249_cov_26.6311_ID_457, whole genome shotgun sequence (249 bp)
Overview 1 RT 1: 3-219 bp Neighborhood of RT #1 [3, 248] RVT-GII Feature: gene Location: 3-248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-219 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII