myRT

myRT report for GCA_002811195.1_ASM281119v1

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Seq: PIQI01000030.1 Pantoea rodasii strain DSM 26611 PRCB30, whole genome shotgun sequence (54900 bp)
Overview 1 RT 1: 39226-42878 bp Neighborhood of RT #1 [39226, 42878] Phage_holin_3_1 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM group_II_RT_mat Feature: gene Location: 39226-39753 bp Feature: domain Description: Phage_holin_3_1 Location: 39418-39724 bp Feature: domain Description: Phage_holin_3_1 Location: 3941 8-39724 bp Feature: gene Location: 39960-40760 bp Feature: domain Description: DDE_Tnp_IS66 Location: 39963-40605 bp Feature: domain Description: DDE_Tnp_IS66 Location: 39963-40605 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 40629-40737 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 40629-40737 bp Feature: gene Location: 40854-41915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40884-41541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40884-41 541 bp Feature: domain Description: GIIM Note: maturase Location: 41643-41841 bp Feature: domain Description: GIIM Note: maturase Location: 41 643-41 841 bp Feature: gene Location: 41930-42097 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 41975-42080 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 41 975-42080 bp Feature: gene Location: 42582-42878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_3_1 (pfam05106), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416)