myRT

myRT report for GCA_002811475.1_ASM281147v1

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Seq: NPDL01000001.1 Leptospira hartskeerlii strain MCA2-B-A3 contig_1, whole genome shotgun sequence (606397 bp)
Overview 1 RT 1: 164438-175422 bp 2 RT 2: 184465-189547 bp Neighborhood of RT #1 [164438, 175422] SpvB SpvB VCBS VCBS VCBS RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RhsA RhsA RVT-Retrons Neighborhood of RT #2 [184465, 189547] Pentapeptide_3 Pentapeptide_3 Pentapeptide_3 RVT-CRISPR-like Feature: gene Location: 164438-165076 bp Feature: gene Location: 165134-172303 bp Feature: domain Description: SpvB Location: 165281-165542 bp Feature: domain Description: SpvB Location: 1 65281 -1 65542 bp Feature: domain Description: SpvB Location: 165596-165767 bp Feature: domain Description: SpvB Location: 1 65596-1 65767 bp Feature: domain Description: VCBS Location: 166436-166634 bp Feature: domain Description: VCBS Location: 1 66436-1 66634 bp Feature: domain Description: VCBS Location: 166835-166997 bp Feature: domain Description: VCBS Location: 1 66835-1 66997 bp Feature: domain Description: VCBS Location: 167582-167762 bp Feature: domain Description: VCBS Location: 1 67582-1 67762 bp Feature: domain Description: RHS_repeat Location: 168701-168812 bp Feature: domain Description: RHS_repeat Location: 1 68701 -1 6881 2 bp Feature: domain Description: RHS_repeat Location: 168911-169010 bp Feature: domain Description: RHS_repeat Location: 1 6891 1 -1 6901 0 bp Feature: domain Description: RHS_repeat Location: 169451-169556 bp Feature: domain Description: RHS_repeat Location: 1 69451 -1 69556 bp Feature: domain Description: RHS_repeat Location: 169580-169676 bp Feature: domain Description: RHS_repeat Location: 1 69580-1 69676 bp Feature: domain Description: RHS_repeat Location: 169697-169769 bp Feature: domain Description: RHS_repeat Location: 1 69697-1 69769 bp Feature: domain Description: RHS_repeat Location: 169787-169862 bp Feature: domain Description: RHS_repeat Location: 1 69787-1 69862 bp Feature: domain Description: RHS_repeat Location: 169913-170024 bp Feature: domain Description: RHS_repeat Location: 1 6991 3-1 70024 bp Feature: domain Description: RHS_repeat Location: 170180-170246 bp Feature: domain Description: RHS_repeat Location: 1 701 80-1 70246 bp Feature: domain Description: RhsA Location: 170249-170630 bp Feature: domain Description: RhsA Location: 1 70249-1 70630 bp Feature: domain Description: RhsA Location: 171374-171590 bp Feature: domain Description: RhsA Location: 1 71 374-1 71 590 bp Feature: gene Location: 172919-173827 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 173045-173594 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 73045-1 73594 bp Feature: gene Location: 173912-174625 bp Feature: gene Location: 174628-175422 bp Feature: gene Location: 184465-185721 bp Feature: domain Description: Pentapeptide_3 Location: 184627-184747 bp Feature: domain Description: Pentapeptide_3 Location: 1 84627-1 84747 bp Feature: domain Description: Pentapeptide_3 Location: 184759-184894 bp Feature: domain Description: Pentapeptide_3 Location: 1 84759-1 84894 bp Feature: domain Description: Pentapeptide_3 Location: 184969-185083 bp Feature: domain Description: Pentapeptide_3 Location: 1 84969-1 85083 bp Feature: gene Location: 185858-186529 bp Feature: gene Location: 187085-188506 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 187475-188096 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 87475-1 88096 bp Feature: gene Location: 188636-188776 bp Feature: gene Location: 188918-189547 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpvB (pfam03534), VCBS (pfam13517), RHS_repeat (pfam05593), RhsA (COG3209), RVT-Retrons, Pentapeptide_3 (pfam13576), RVT-CRISPR