myRT

myRT report for GCA_002811585.1_ASM281158v1

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Seq: NQVM01000017.1 Klebsiella pneumoniae strain WCHKP1929 NODE_17_length_120383_cov_117.435, whole genome shotgun sequence (120383 bp)
Overview 1 RT 1: 480-7531 bp Neighborhood of RT #1 [480, 7548] PRK09692 Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 480-1343 bp Feature: domain Description: PRK09692 Location: 504-1341 bp Feature: domain Description: PRK09692 Location: 504-1 341 bp Feature: gene Location: 1604-2044 bp Feature: domain Description: Integrase_1 Location: 1610-1826 bp Feature: domain Description: Integrase_1 Location: 1 61 0-1 826 bp Feature: gene Location: 2101-4179 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2509-2953 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2509-2953 bp Feature: gene Location: 4179-6788 bp Feature: domain Description: FimD Location: 4236-6777 bp Feature: domain Description: FimD Location: 4236-6777 bp Feature: gene Location: 6820-7548 bp Feature: domain Description: FimC Location: 6868-7531 bp Feature: domain Description: FimC Location: 6868-7531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NQVM01000045.1 Klebsiella pneumoniae strain WCHKP1929 NODE_45_length_1864_cov_304.602, whole genome shotgun sequence (1864 bp)
Overview 1 RT 1: 19-1863 bp Neighborhood of RT #1 [19, 1863] RVT-GII Feature: gene Location: 19-1029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25-637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5-637 bp Feature: gene Location: 1141-1506 bp Feature: gene Location: 1660-1863 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII