myRT

myRT report for GCA_002812685.3_ASM281268v3

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Seq: CP025036.2 Escherichia coli strain S17-20 chromosome (5206389 bp)
Overview 1 RT 1: 659459-663341 bp 2 RT 2: 4615003-4619848 bp 3 RT 3: 4644862-4648519 bp Neighborhood of RT #1 [659459, 663346] dut slmA RVT-Retrons pyrE rph Neighborhood of RT #2 [4615003, 4619848] DUF3987 Inovirus_Gp2 RVT-GII Neighborhood of RT #3 [4644862, 4648519] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 659459-659917 bp Feature: domain Description: dut Location: 659465-659912 bp Feature: domain Description: dut Location: 659465-65991 2 bp Feature: gene Location: 660024-660620 bp Feature: domain Description: slmA Location: 660030-660606 bp Feature: domain Description: slmA Location: 660030-660606 bp Feature: gene Location: 660666-661625 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 660801-661350 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 660801 -661 350 bp Feature: gene Location: 661923-662579 bp Feature: domain Description: pyrE Location: 661941-662574 bp Feature: domain Description: pyrE Location: 661 941 -662574 bp Feature: gene Location: 662630-663346 bp Feature: domain Description: rph Location: 662633-663341 bp Feature: domain Description: rph Location: 662633-663341 bp Feature: gene Location: 4615003-4616436 bp Feature: domain Description: DUF3987 Location: 4615096-4616173 bp Feature: domain Description: DUF3987 Location: 461 5096-461 61 73 bp Feature: gene Location: 4617294-4617857 bp Feature: domain Description: Inovirus_Gp2 Location: 4617351-4617792 bp Feature: domain Description: Inovirus_Gp2 Location: 461 7351 -461 7792 bp Feature: gene Location: 4618183-4619346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4618297-4618984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 8297-461 8984 bp Feature: gene Location: 4619333-4619641 bp Feature: gene Location: 4619675-4619848 bp Feature: gene Location: 4644862-4645188 bp Feature: domain Description: InsE Location: 4644865-4645186 bp Feature: domain Description: InsE Location: 4644865-46451 86 bp Feature: gene Location: 4645188-4645667 bp Feature: domain Description: PHA02517 Location: 4645248-4645602 bp Feature: domain Description: PHA0251 7 Location: 4645248-4645602 bp Feature: gene Location: 4646259-4647782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4646532-4647264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4646532-4647264 bp Feature: domain Description: GIIM Note: maturase Location: 4647339-4647537 bp Feature: domain Description: GIIM Note: maturase Location: 4647339-4647537 bp Feature: gene Location: 4647905-4648315 bp Feature: domain Description: PHA02517 Location: 4647908-4648310 bp Feature: domain Description: PHA0251 7 Location: 4647908-464831 0 bp Feature: gene Location: 4648349-4648519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173), DUF3987 (pfam13148), Inovirus_Gp2 (pfam11726), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)
GIIM (pfam08388)